RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GIT2Q14161 759 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 CT47A1Q5JQC4 288 aaPredicted RBP13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 SAPCD2Q86UD0 394 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 MROH8Q9H579 483 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 RWDD2AQ9UIY3 292 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 ZKSCAN5Q9Y2L8 839 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 SLC45A1Q9Y2W3 748 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 SERPINC1P01008 464 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 RINT1Q6NUQ1 792 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 NACC1Q96RE7 527 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 GPBP1L1Q9HC44 474 aaPredicted RBP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 DNAJC25-GNG10A0A024R161 153 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 SFI1A8K8P3 1242 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 MAFGO15525 162 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 STAM2O75886 525 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 EDNRBP24530 442 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 COPB2P35606 906 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 KRT76Q01546 638 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 STIM1Q13586 685 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 MRFAP1L1Q96HT8 127 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 DOCK3Q8IZD9 2030 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 MYH11P35749 1972 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
SPTBN1-203ENST00000389980 LRRC37A2A6NM11 1700 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 WDR64B1ANS9 1081 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■■■□□ 16.7
SPTBN1-203ENST00000389980 PSMA7O14818 248 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 UBASH3AP57075 661 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 CCDC65Q8IXS2 484 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 C1orf186Q6ZWK4 172 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■□□□□ 9.2
SPTBN1-203ENST00000389980 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 SHCBP1Q8NEM2 672 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 CDHR1Q96JP9 859 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 SEMA6BQ9H3T3 888 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 SLC9A2Q9UBY0 812 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 PCDHA2Q9Y5H9 948 aa13.55□□□□□ -0.24
SPTBN1-203ENST00000389980 MUTP22033 750 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 GCLCP48506 637 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 JAK3P52333 1124 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CCNA1P78396 465 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CCDC144BQ3MJ40 725 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 P2RX5Q93086 422 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 PCDHA10Q9Y5I2 948 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 KIF3CO14782 793 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CCNE1P24864 410 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ADORA2AP29274 412 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 SFNP31947 248 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ICAM3P32942 547 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CASP5P51878 434 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ACTR2P61160 394 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 MAEAQ7L5Y9 396 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 TRIM47Q96LD4 638 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 DUSP9Q99956 384 aaKnown RBP13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
SPTBN1-203ENST00000389980 NFASCO94856 1347 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 ARHGEF35A5YM69 484 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 PTGS1P23219 599 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms