RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 POC1B-GALNT4F8VUJ3 575 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 TMED2Q15363 201 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 CLTAP09496 248 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 LIFRP42702 1097 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 SH3BGRP55822 239 aaPredicted RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 C11orf57Q6ZUT1 292 aaPredicted RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 CALN1Q9BXU9 219 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ERBB3P21860 1342 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ANKRD13CQ8N6S4 541 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 LRRD1A4D1F6 860 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 TTI1O43156 1089 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 RNF139Q8WU17 664 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 MAN1B1Q9UKM7 699 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 EIF4A3P38919 411 aaKnown RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 NR5A1Q13285 461 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 SNCBQ16143 134 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 MYLK4Q86YV6 388 aaPredicted RBP13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 CCNYQ8ND76 341 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 GSTA4O15217 222 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ZBTB33Q86T24 672 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 PPFIA2O75334 1257 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 ATP6V1E2Q96A05 226 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 PANX2Q96RD6 677 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 CACNA1CQ13936 2221 aa13.28□□□□□ -0.28
KCNQ3-201ENST00000388996 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 RTKN2Q8IZC4 609 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 RPF1Q9H9Y2 349 aaKnown RBP13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 RXRBP28702 533 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 UHMK1Q8TAS1 419 aaKnown RBP13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 DRC3Q9H069 523 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 ZNF500O60304 480 aaPredicted RBP13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.28
KCNQ3-201ENST00000388996 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 EXOC1LA0A1B0GW35 172 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 CYP21A2P08686 494 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 MCUQ8NE86 351 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 GPC4O75487 556 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 CD58P19256 250 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 LRRC41Q15345 812 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 PBKQ96KB5 322 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 NFKBIAP25963 317 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 WHAMMQ8TF30 809 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 COA7Q96BR5 231 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 ATP8A1Q9Y2Q0 1164 aa13.27□□□□□ -0.29
KCNQ3-201ENST00000388996 PSMA2P25787 234 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 MSH2P43246 934 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 ARL6IP4Q66PJ3 421 aaKnown RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 SLFN12LQ6IEE8 588 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 PIGBQ92521 554 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 MYH3P11055 1940 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 F8W8V4 182 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 RBL2Q08999 1139 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 GRAPQ13588 217 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 ENC1O14682 589 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 CDK8P49336 464 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 TMED8Q6PL24 325 aaPredicted RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 CLIC2O15247 247 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 FAM167AQ96KS9 214 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 KCTD16Q68DU8 428 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 UNC5CLQ8IV45 518 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 CACNA1BQ00975 2339 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 SERPING1P05155 500 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 MARK3P27448 753 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 ZBED1O96006 694 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 PHEXP78562 749 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 SNX1Q13596 522 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 SLC35F6Q8N357 371 aa13.26□□□□□ -0.29
KCNQ3-201ENST00000388996 MMP10P09238 476 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 IFNAR1P17181 557 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 IRAK4Q9NWZ3 460 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 NT5C2P49902 561 aa13.25□□□□□ -0.29
KCNQ3-201ENST00000388996 BASP1P80723 227 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms