RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 GFPT2O94808 682 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 APBA3O96018 575 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 GH2P01242 217 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 SETQ01105 290 aaPredicted RBP13.92□□□□□ -0.18
PUDP-201ENST00000381077 KCNH2Q12809 1159 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 IKQ13123 557 aaPredicted RBP13.92□□□□□ -0.18
PUDP-201ENST00000381077 TDRD12Q587J7 1177 aaKnown RBP13.92□□□□□ -0.18
PUDP-201ENST00000381077 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 OSBPL9Q96SU4 736 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 GANQ9H2C0 597 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 CALCOCO1Q9P1Z2 691 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 CAPN6Q9Y6Q1 641 aa13.92□□□□□ -0.18
PUDP-201ENST00000381077 IGLV3-22A0A075B6J6 115 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 GRID2IPA4D2P6 1211 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 AFPP02771 609 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 PRKCIP41743 596 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 CACNB3P54284 484 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 NAB2Q15742 525 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 IFI16Q16666 785 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 ZNF772Q68DY9 489 aaPredicted RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 FAM151AQ8WW52 585 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 CSRNP1Q96S65 589 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 P2RX7Q99572 595 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 MRPL11Q9Y3B7 192 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 PCDHGC5Q9Y5F6 944 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 OPLAHO14841 1288 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 XRCC5P13010 732 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 ZNF76P36508 570 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 POLR2FP61218 127 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 ASIC2Q16515 512 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 HSD17B14Q9BPX1 270 aa13.91□□□□□ -0.18
PUDP-201ENST00000381077 EIF2AK1Q9BQI3 630 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 TDRD3Q9H7E2 651 aaKnown RBP13.91□□□□□ -0.18
PUDP-201ENST00000381077 FAM196BA6NMK8 535 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 RAD21O60216 631 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 TLR2O60603 784 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 GDF11O95390 407 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 STAT3P40763 770 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 MYBPC2Q14324 1141 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 CFAP221Q4G0U5 840 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
PUDP-201ENST00000381077 SFR1Q86XK3 245 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 SAMD3Q8N6K7 520 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 SPATA4Q8NEY3 305 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.18
PUDP-201ENST00000381077 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 ADAM21Q9UKJ8 722 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 INTUQ9ULD6 942 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.18
PUDP-201ENST00000381077 POLR3GO15318 223 aaPredicted RBP13.9□□□□□ -0.18
PUDP-201ENST00000381077 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.18
PUDP-201ENST00000381077 SRGAP2O75044 1071 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 PSMD10O75832 226 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 MOCS3O95396 460 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 POLR2MP0CAP2 368 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 GFPT1Q06210 699 aaPredicted RBP13.9□□□□□ -0.18
PUDP-201ENST00000381077 KLHL30Q0D2K2 578 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.181e-9■□□□□ 11
PUDP-201ENST00000381077 CCDC181Q5TID7 509 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 TMEM174Q8WUU8 243 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 GJA10Q969M2 543 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 TFR2Q9UP52 801 aa13.9□□□□□ -0.18
PUDP-201ENST00000381077 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 H3BQF6 201 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 TFRCP02786 760 aaKnown RBP13.89□□□□□ -0.19
PUDP-201ENST00000381077 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 ZNF131P52739 623 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 AOC3Q16853 763 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 USH1GQ495M9 461 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 MUM1L1Q5H9M0 696 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
PUDP-201ENST00000381077 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 CAPZA3Q96KX2 299 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
PUDP-201ENST00000381077 PSMD1Q99460 953 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
PUDP-201ENST00000381077 TNS1Q9HBL0 1735 aaKnown RBP13.89□□□□□ -0.19
PUDP-201ENST00000381077 FRMPD4Q14CM0 1322 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms