RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 IL9RQ01113 521 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 KCTD2Q14681 263 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 NAA30Q147X3 362 aaPredicted RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 ARMC9Q7Z3E5 817 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 SRBD1Q8N5C6 995 aaKnown RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 TTLL3Q9Y4R7 772 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 H7C0C1 242 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 INO80B-WBP1J3KQ70 363 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 ATP5OP48047 213 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 SFR1Q86XK3 245 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 NSUN4Q96CB9 384 aaKnown RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 CAPN9O14815 690 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 KCNH2Q12809 1159 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 COASYQ13057 564 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 PDIA6Q15084 440 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 CNOT10Q9H9A5 744 aaKnown RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 ADAM21Q9UKJ8 722 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 POLR1AO95602 1720 aaPredicted RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 E9PMD0 336 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 NR3C1P04150 777 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 EIF2AK2P19525 551 aaKnown RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 DPF2Q92785 391 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.22□□□□□ -0.45
RPGR-203ENST00000378505 NFU1Q9UMS0 254 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 SFI1A8K8P3 1242 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 NR1D1P20393 614 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 CACNB3P54284 484 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.21□□□□□ -0.45
RPGR-203ENST00000378505 PPP4R1Q8TF05 950 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
RPGR-203ENST00000378505 ANAPC5Q9UJX4 755 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 DNAJC12Q9UKB3 198 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 INO80Q9ULG1 1556 aaPredicted RBP12.21□□□□□ -0.45
RPGR-203ENST00000378505 LRRIQ1Q96JM4 1722 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 KIAA1210Q9ULL0 1709 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 PALMO75781 387 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 CCND2P30279 289 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 ANTXR2P58335 489 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 SNX1Q13596 522 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 LLGL1Q15334 1064 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 KCNF1Q9H3M0 494 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
RPGR-203ENST00000378505 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.46
RPGR-203ENST00000378505 FDPSP14324 419 aaKnown RBP12.21□□□□□ -0.46
RPGR-203ENST00000378505 DR1Q01658 176 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 SF3B3Q15393 1217 aaKnown RBP12.21□□□□□ -0.46
RPGR-203ENST00000378505 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 PHLDB2Q86SQ0 1253 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 EFCAB13Q8IY85 973 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 EXOC8Q8IYI6 725 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 ANKRD36BP1Q96IX9 119 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 A0A087WUV0 522 aaPredicted RBP12.21□□□□□ -0.46
RPGR-203ENST00000378505 MIF4GDA9UHW6 222 aaKnown RBP12.21□□□□□ -0.46
RPGR-203ENST00000378505 SGK1O00141 431 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 SRGAP2O75044 1071 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 CLTAP09496 248 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 YWHAGP61981 247 aaKnown RBP eCLIP12.21□□□□□ -0.46
RPGR-203ENST00000378505 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 DNAJC24Q6P3W2 148 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.46
RPGR-203ENST00000378505 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 ZNF233A6NK53 670 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 POTECB2RU33 542 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 FGGP02679 453 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 PSAPP07602 524 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 SLC8A1P32418 973 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
RPGR-203ENST00000378505 SNAP25P60880 206 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
RPGR-203ENST00000378505 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 INHBAP08476 426 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 PEX3P56589 373 aa12.2□□□□□ -0.46
RPGR-203ENST00000378505 CCZ1BP86790 482 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms