RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 CCT8L2Q96SF2 557 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 STIM2Q9P246 746 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 MAPK8IP1Q9UQF2 711 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 DDAH1O94760 285 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 GOLGA8HP0CJ92 632 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PDHBP11177 359 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 GCFC2P16383 781 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 WLSQ5T9L3 541 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 LRCH2Q5VUJ6 765 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PPP1R37O75864 691 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 NDUFB10O96000 172 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PARP1P09874 1014 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 SEC24CP53992 1094 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 BACE1P56817 501 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PPATQ06203 517 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PTGISQ16647 500 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 NLRP14Q86W24 1093 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 CAVIN3Q969G5 261 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 SH2D4AQ9H788 454 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 NHEJ1Q9H9Q4 299 aaPredicted RBP16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
CCHCR1-201ENST00000376266 DEXIO95424 95 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 GJA5P36382 358 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 MKRN3Q13064 507 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 SNCBQ16143 134 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 RTN1Q16799 776 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC181Q5TID7 509 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 STAG2Q8N3U4 1231 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 GMCL1P1Q8NEA9 526 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 KIAA1683Q9H0B3 1180 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 NR1D1P20393 614 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 HMGCS2P54868 508 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 APBA1Q02410 837 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 ITIH3Q06033 890 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 MYCBPAPQ8TBZ2 947 aa16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC43Q96MW1 224 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-201ENST00000376266 GOLGA6L7A0A1B0GV03 622 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 LGALS16A8MUM7 142 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 NEBLO76041 1014 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 CALM1P0DP23 149 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 CALM2P0DP24 149 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 CALM3P0DP25 149 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 VAV2P52735 878 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 E7EVH7 732 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 PPP1R12AO14974 1030 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 TACC1O75410 805 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 SNHG28P0DPA3 235 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 SLC1A4P43007 532 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 MEA1Q16626 185 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 TRIM58Q8NG06 486 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 FERMT2Q96AC1 680 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 SYNPO2Q9UMS6 1093 aa16.53■□□□□ 0.24
CCHCR1-201ENST00000376266 SSBP05455 408 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 PPIL2Q13356 520 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 DRP2Q13474 957 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 GRM4Q14833 912 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC96Q2M329 555 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 HAUS3Q68CZ6 603 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 C8orf74Q6P047 294 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC170Q8IYT3 715 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 PSMB7Q99436 277 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 TLL2Q9Y6L7 1015 aa16.52■□□□□ 0.24
CCHCR1-201ENST00000376266 EZRP15311 586 aaKnown RBP16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 TRIM21P19474 475 aaKnown RBP16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 PAX7P23759 505 aa16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 RCAN1P53805 252 aa16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 ZNF658Q5TYW1 1059 aaPredicted RBP16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 TSGA10Q9BZW7 698 aa16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 SMARCAL1Q9NZC9 954 aa16.52■□□□□ 0.23
CCHCR1-201ENST00000376266 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms