RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SHROOM2Q13796 1616 aa7.63□□□□□ -1.19
SPTA1-201ENST00000368147 POC1B-GALNT4F8VUJ3 575 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 GOLGA8RI6L899 631 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 GNA14O95837 355 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PSMC5P62195 406 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 TMED1Q13445 227 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 NUP58Q9BVL2 599 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 CALN1Q9BXU9 219 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ESRRBO95718 433 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PMLP29590 882 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 TAF1CQ15572 869 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 KDELC2Q7Z4H8 507 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 BBS5Q8N3I7 341 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 CNOT7Q9UIV1 285 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ZNF148Q9UQR1 794 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 GTPBP10A4D1E9 387 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 EVI5O60447 810 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 TTC4O95801 387 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PHBP35232 272 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 RMDN3Q96TC7 470 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 MRPS26Q9BYN8 205 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 CCDC85CA6NKD9 419 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 CREB3O43889 395 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ATP5JP18859 108 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 MTMR1Q13613 665 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 MTMR2Q13614 643 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ZKSCAN8Q15776 578 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 KRBA2Q6ZNG9 492 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 C17orf53Q8N3J3 647 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ACCSQ96QU6 501 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PPP1R2P41236 205 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 SCARF1Q14162 830 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 C16orf72Q14CZ0 275 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 DARS2Q6PI48 645 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 SMAP1Q8IYB5 467 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 LLPHQ9BRT6 129 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ARMCX3Q9UH62 379 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 GRIK1P39086 918 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 ATN1P54259 1190 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 MRPL28Q13084 256 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 KLHL40Q2TBA0 621 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 DSCC1Q9BVC3 393 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 KANSL2Q9H9L4 492 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 NFKBIL1Q9UBC1 381 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-201ENST00000368147 PCDHA4Q9UN74 947 aa7.62□□□□□ -1.19
SPTA1-201ENST00000368147 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 BTBD18B2RXH4 712 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 KRIT1O00522 736 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 CHL1O00533 1208 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 NMT2O60551 498 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 HMBSP08397 361 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 KRT7P08729 469 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 RECQLP46063 649 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 THOC5Q13769 683 aaKnown RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 TRIP13Q15645 432 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 GRAMD1CQ8IYS0 662 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 TEX12Q9BXU0 123 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 BABAM1Q9NWV8 329 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 ARHGAP42A6NI28 874 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 BHMTQ93088 406 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 SAMSN1Q9NSI8 373 aaKnown RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 HOXC10Q9NYD6 342 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 HPCAL4Q9UM19 191 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 ATP10DQ9P241 1426 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 C4BPBP20851 252 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 YWHAGP61981 247 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 PTK2Q05397 1052 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 NFE2L3Q9Y4A8 694 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 TMEM191CA6NGB0 347 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 DDHD2O94830 711 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 SRGAP2BP0DMP2 458 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 NSFP46459 744 aaKnown RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 STXBP2Q15833 593 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 IFT20Q8IY31 132 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 EXOC8Q8IYI6 725 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 COA1Q9GZY4 146 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 PNMA2Q9UL42 364 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 NDUFAB1O14561 156 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 DDAH1O94760 285 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 KRT4P19013 534 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 CIITAP33076 1130 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 CC2D1AQ6P1N0 951 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 TRIM42Q8IWZ5 723 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 CBX8Q9HC52 389 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 KCNG1Q9UIX4 513 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 K7ERI5 159 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 MAP3K7O43318 606 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 IGSF3O75054 1194 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 RHOBTB1O94844 696 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 MOCS2O96007 188 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-201ENST00000368147 MFAP3P55082 362 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 RASSF7Q02833 373 aa7.61□□□□□ -1.19
SPTA1-201ENST00000368147 ANKRD20A3Q5VUR7 823 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms