RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 GLE1Q53GS7 698 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 DENND2CQ68D51 928 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CENPPQ6IPU0 288 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 TPH2Q8IWU9 490 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RNF10Q8N5U6 811 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF384Q8TF68 577 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 N4BP2L2Q92802 583 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ODF2LQ9ULJ1 636 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PVALEFA0A1B0GWK0 134 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 A0A1W2PQJ5 194 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 DDX39AO00148 427 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 HSD17B3P37058 310 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PRPHP41219 470 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SNCBQ16143 134 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SLC51AQ86UW1 340 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC105Q8IYK2 499 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 KIRREL3Q8IZU9 778 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 NCAPGQ9BPX3 1015 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SIK3Q9Y2K2 1263 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SPOPO43791 374 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 AFPP02771 609 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ITGA4P13612 1032 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RPL13P26373 211 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 GRIK5Q16478 980 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 TBC1D1Q86TI0 1168 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SFR1Q86XK3 245 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ELAC2Q9BQ52 826 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ZMYND12Q9H0C1 365 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 NT5C3AQ9H0P0 336 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 KLC4Q9NSK0 619 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 BLOC1S4Q9NUP1 217 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RNF14Q9UBS8 474 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PCDHA1Q9Y5I3 950 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 FECHP22830 423 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 MTMR3Q13615 1198 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CDC37Q16543 378 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 FBXO33Q7Z6M2 555 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 GLYCTKQ8IVS8 523 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 USP38Q8NB14 1042 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PIGOQ8TEQ8 1089 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CYFIP2Q96F07 1278 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 THOC1Q96FV9 657 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 FMO2Q99518 471 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 TMOD4Q9NZQ9 345 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RASAL2Q9UJF2 1139 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SCN11AQ9UI33 1791 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CAMTA1Q9Y6Y1 1673 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MYO5AQ9Y4I1 1855 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF335Q9H4Z2 1342 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 BAZ2AQ9UIF9 1905 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CALUO43852 315 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 GNA14O95837 355 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 NEFHP12036 1026 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MESDQ14696 234 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 NFIXQ14938 502 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 LRRC14Q15048 493 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 NAB2Q15742 525 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SLC30A10Q6XR72 485 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 HS2ST1Q7LGA3 356 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PHLDB2Q86SQ0 1253 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 ANKS1AQ92625 1134 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 TTYH3Q9C0H2 523 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 BHMT2Q9H2M3 363 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PNMA2Q9UL42 364 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 DAAM1Q9Y4D1 1078 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 GRID2IPA4D2P6 1211 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 HLA-DOAP06340 250 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CACNB3P54284 484 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PPP2R2AP63151 447 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC13Q8IYE1 715 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CNBD1Q8NA66 436 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MMTAG2Q9BU76 263 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 FGFBP2Q9BYJ0 223 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 TAOK3Q9H2K8 898 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 INTS9Q9NV88 658 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MTRF1LQ9UGC7 380 aaKnown RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MYH13Q9UKX3 1938 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MYH6P13533 1939 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PALM3A6NDB9 673 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CHUKO15111 745 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 EXOC3O60645 756 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SLURP2P0DP57 97 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 AKR1B1P15121 316 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 PLCG2P16885 1265 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 HOXA13P31271 388 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SNX1Q13596 522 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SBK1Q52WX2 424 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF746Q6NUN9 644 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-203ENST00000358528 HOOK3Q86VS8 718 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 SPATS2Q86XZ4 545 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms