RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CXCR5P32302 372 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 OTULINQ96BN8 352 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
SPTBN1-202ENST00000356805 ELF1P32519 619 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 G2E3Q7L622 706 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CHEK2O96017 543 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ARL4AP40617 200 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CAV1Q03135 178 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TRIP13Q15645 432 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 DENND4BO75064 1496 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 AP2B1P63010 937 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 MECOMQ03112 1051 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 C2orf54Q08AI8 447 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ENC1O14682 589 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ECEL1O95672 775 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 MCF2P10911 925 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 TEX12Q9BXU0 123 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 GCFC2P16383 781 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 VCPP55072 806 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CDO1Q16878 200 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 LRRC4Q9HBW1 653 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 STAP2Q9UGK3 403 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 SLC4A7Q9Y6M7 1214 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 USP17L21D6R901 530 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 NDUFA10O95299 355 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.433e-7■■□□□ 13.4
SPTBN1-202ENST00000356805 ZFYVE19Q96K21 471 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CNOT6LQ96LI5 555 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 E2F6O75461 281 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 SLCO1A2P46721 670 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CTSWP56202 376 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 ZNF827Q17R98 1081 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 RNF219Q5W0B1 726 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 CEP70Q8NHQ1 597 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 RAPGEF5Q92565 580 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 PCIF1Q9H4Z3 704 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 KMT5AQ9NQR1 393 aa12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-202ENST00000356805 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MED7O43513 233 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 HOXC9P31274 260 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 SPARCL1Q14515 664 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ANO5Q75V66 913 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 KDM5AP29375 1690 aaKnown RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 GCP02774 474 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 HADHAP40939 763 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 HDAC4P56524 1084 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 GCKRQ14397 625 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 WDR48Q8TAF3 677 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 YIPF3Q9GZM5 350 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MMEP08473 750 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MRPS35P82673 323 aaKnown RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 CRYMQ14894 314 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 GIPC2Q8TF65 315 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 NT5C1BQ96P26 610 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MARK3P27448 753 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ICA1Q05084 483 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 F8W8V4 182 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 MOCS3O95396 460 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 EYA1Q99502 592 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 FOXP2O15409 715 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ANP32DO95626 131 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 IFNA8P32881 189 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
SPTBN1-202ENST00000356805 M0R2C6 588 aa12.33□□□□□ -0.43
SPTBN1-202ENST00000356805 GYG2O15488 501 aa12.33□□□□□ -0.43
SPTBN1-202ENST00000356805 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.43
SPTBN1-202ENST00000356805 HIPK4Q8NE63 616 aa12.33□□□□□ -0.43
SPTBN1-202ENST00000356805 CLIC6Q96NY7 704 aa12.33□□□□□ -0.43
SPTBN1-202ENST00000356805 TRIM55Q9BYV6 548 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms