RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 GLG1Q92896 1179 aa17.98■□□□□ 0.47
FDPS-201ENST00000356657 FAM167AQ96KS9 214 aa17.98■□□□□ 0.47
FDPS-201ENST00000356657 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
FDPS-201ENST00000356657 ZNF302Q9NR11 478 aa17.98■□□□□ 0.47
FDPS-201ENST00000356657 TCHHQ07283 1943 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 HAS3O00219 553 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 CHMP2AO43633 222 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 SORBS3O60504 671 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 STAT5BP51692 787 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 FAM173BQ6P4H8 233 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 SESTD1Q86VW0 696 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 PAWRQ96IZ0 340 aaKnown RBP17.97■□□□□ 0.47
FDPS-201ENST00000356657 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
FDPS-201ENST00000356657 MAFBQ9Y5Q3 323 aaPredicted RBP17.97■□□□□ 0.47
FDPS-201ENST00000356657 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
FDPS-201ENST00000356657 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 PPP6R2O75170 966 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 P4HBP07237 508 aaKnown RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 ZNF286BP0CG31 522 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 LONP1P36776 959 aaKnown RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 TECP42680 631 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 SNX17Q15036 470 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 STK38Q15208 465 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 FOXD4L5Q5VV16 416 aaPredicted RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 NCAPH2Q6IBW4 605 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 CCDC60Q8IWA6 550 aaPredicted RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 LINC00301Q8NCQ3 95 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 FOXD4L4Q8WXT5 416 aaPredicted RBP17.96■□□□□ 0.47
FDPS-201ENST00000356657 KAT2BQ92831 832 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 GJA10Q969M2 543 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
FDPS-201ENST00000356657 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 PSEN2P49810 448 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 PSMC5P62195 406 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 MFSD10Q14728 455 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 KIAA0753Q2KHM9 967 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 SWSAP1Q6NVH7 229 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 PDXDC2PQ6P474 469 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 TUFT1Q9NNX1 390 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 PPME1Q9Y570 386 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 COL1A2P08123 1366 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 POTEMA6NI47 508 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 SPTLC2O15270 562 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 LYPLA2O95372 231 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 GNAT1P11488 350 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 DNM1Q05193 864 aaKnown RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 UTP14CQ5TAP6 766 aaKnown RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 KRI1Q8N9T8 703 aaKnown RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 BBXQ8WY36 941 aaPredicted RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 PCYT2Q99447 389 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 HSD17B14Q9BPX1 270 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 POLR3CQ9BUI4 534 aaPredicted RBP17.95■□□□□ 0.46
FDPS-201ENST00000356657 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 ZSWIM4Q9H7M6 989 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 GABBR1Q9UBS5 961 aa17.95■□□□□ 0.46
FDPS-201ENST00000356657 NRCAMQ92823 1304 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 KDM3AQ9Y4C1 1321 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 VWA3AA6NCI4 1184 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 ARVCFO00192 962 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 EML1O00423 815 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 HBP1O60381 514 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 RPA1P27694 616 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 KRT79Q5XKE5 535 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 TRIM50Q86XT4 487 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 C4orf19Q8IY42 314 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 DIS3LQ8TF46 1054 aaKnown RBP17.94■□□□□ 0.46
FDPS-201ENST00000356657 DPF3Q92784 378 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 EIF2AK1Q9BQI3 630 aaKnown RBP17.94■□□□□ 0.46
FDPS-201ENST00000356657 LXNQ9BS40 222 aa17.94■□□□□ 0.46
FDPS-201ENST00000356657 RRN3P2A6NIE6 340 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 RPLP2P05387 115 aaKnown RBP17.93■□□□□ 0.46
FDPS-201ENST00000356657 CEBPZQ03701 1054 aaKnown RBP17.93■□□□□ 0.46
FDPS-201ENST00000356657 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 SLC39A5Q6ZMH5 540 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
FDPS-201ENST00000356657 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
FDPS-201ENST00000356657 NT5C3AQ9H0P0 336 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 NRBP2Q9NSY0 501 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
FDPS-201ENST00000356657 POTEB3A0JP26 581 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 OATP04181 439 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
FDPS-201ENST00000356657 HOXC8P31273 242 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 TXLNAP40222 546 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 CDK7P50613 346 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 POTEBQ6S5H4 581 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 CKAP2LQ8IYA6 745 aa17.92■□□□□ 0.46
FDPS-201ENST00000356657 EXOC8Q8IYI6 725 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms