RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GRB10Q13322 594 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TDRD12Q587J7 1177 aaKnown RBP10.26□□□□□ -0.77
SMG6-202ENST00000354901 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 GALNT17Q6IS24 598 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 CNNM4Q6P4Q7 775 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TRIM74Q86UV6 250 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TRIM73Q86UV7 250 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 NELFCDQ8IXH7 590 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 DAGLBQ8NCG7 672 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 OR2W6PQ8NHA6 318 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 NEDD1Q8NHV4 660 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 SPZ1Q9BXG8 430 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 NFU1Q9UMS0 254 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 ECEL1O95672 775 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TRAF1Q13077 416 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
SMG6-202ENST00000354901 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
SMG6-202ENST00000354901 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 PHF20L1A8MW92 1017 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 PSMD14O00487 310 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 LAD1O00515 517 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 PDHA1P08559 390 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 GNAT1P11488 350 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 AKR1B1P15121 316 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 EIF4A3P38919 411 aaKnown RBP10.26□□□□□ -0.77
SMG6-202ENST00000354901 PRPHP41219 470 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 SCTRP47872 440 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 SCNN1DP51172 638 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TUBB4BP68371 445 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TUBB2AQ13885 445 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 QPCTQ16769 361 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 C16orf86Q6ZW13 317 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TMC4Q7Z404 712 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 MSL3Q8N5Y2 521 aaKnown RBP10.26□□□□□ -0.77
SMG6-202ENST00000354901 AK8Q96MA6 479 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 SH3GL2Q99962 352 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 TUBB2BQ9BVA1 445 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 NUP58Q9BVL2 599 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 OSBPL7Q9BZF2 842 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 NDST4Q9H3R1 872 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 BLOC1S4Q9NUP1 217 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 GGA1Q9UJY5 639 aa10.26□□□□□ -0.77
SMG6-202ENST00000354901 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 NCK2O43639 380 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 BUB1O43683 1085 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 PECAM1P16284 738 aaPredicted RBP10.25□□□□□ -0.77
SMG6-202ENST00000354901 PPP4CP60510 307 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 TMEM266Q2M3C6 531 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 SLC30A9Q6PML9 568 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 CCDC50Q8IVM0 306 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
SMG6-202ENST00000354901 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 CCDC97Q96F63 343 aaPredicted RBP10.25□□□□□ -0.77
SMG6-202ENST00000354901 C7orf25Q9BPX7 421 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 TTYH3Q9C0H2 523 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 EP400Q96L91 3159 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 RAB27AP51159 221 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 ADCY7P51828 1080 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 LAMB3Q13751 1172 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 CACNA2D3Q8IZS8 1091 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 B4GALNT2Q8NHY0 566 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 DDX12PQ92771 950 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 TSC22D3Q99576 134 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 LZTS2Q9BRK4 669 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 CCDC88AQ3V6T2 1871 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 IRS2Q9Y4H2 1338 aa10.25□□□□□ -0.77
SMG6-202ENST00000354901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
SMG6-202ENST00000354901 A0A1B0GVG6 124 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 LRRC53A6NM62 1247 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 TRAF5O00463 557 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 ATP6V1G2O95670 118 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 PTPROQ16827 1216 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 KRT79Q5XKE5 535 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 CCDC63Q8NA47 563 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 PRCCQ92733 491 aaPredicted RBP10.24□□□□□ -0.77
SMG6-202ENST00000354901 SMIM23A6NLE4 172 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 MYL1P05976 194 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 NEFHP12036 1026 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 KIF11P52732 1056 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 POLE2P56282 527 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 MEA1Q16626 185 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 VWA3BQ502W6 1294 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 C8orf74Q6P047 294 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 NFRKBQ6P4R8 1299 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 CUEDC2Q9H467 287 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 POLLQ9UGP5 575 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 KIAA1551Q9HCM1 1747 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 GPR75-ASB3A0A0A6YYF3 556 aa10.24□□□□□ -0.77
SMG6-202ENST00000354901 FAM153BP0C7A2 387 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms