RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 NRCAMQ92823 1304 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 PSMD10O75832 226 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 IQCF3P0C7M6 154 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 STAT5BP51692 787 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 B3GNT9Q6UX72 402 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 CCDC60Q8IWA6 550 aaPredicted RBP25.01■■□□□ 1.59
SNX3-202ENST00000349379 CCDC155Q8N6L0 562 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 LMBR1Q8WVP7 490 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 AZI2Q9H6S1 392 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 KCNMB3Q9NPA1 279 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 SETD4Q9NVD3 440 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 EVPLQ92817 2033 aa25.01■■□□□ 1.59
SNX3-202ENST00000349379 TREHO43280 583 aa25■■□□□ 1.59
SNX3-202ENST00000349379 GNAT1P11488 350 aa25■■□□□ 1.59
SNX3-202ENST00000349379 MARK3P27448 753 aa25■■□□□ 1.59
SNX3-202ENST00000349379 SLC26A2P50443 739 aa25■■□□□ 1.59
SNX3-202ENST00000349379 GUCY1B3Q02153 619 aa25■■□□□ 1.59
SNX3-202ENST00000349379 TMEM240Q5SV17 173 aa25■■□□□ 1.59
SNX3-202ENST00000349379 LRCH2Q5VUJ6 765 aa25■■□□□ 1.59
SNX3-202ENST00000349379 FAM184AQ8NB25 1140 aa25■■□□□ 1.59
SNX3-202ENST00000349379 ATP6V0A1Q93050 837 aa25■■□□□ 1.59
SNX3-202ENST00000349379 SCLYQ96I15 445 aa25■■□□□ 1.59
SNX3-202ENST00000349379 NAP1L4Q99733 375 aaKnown RBP25■■□□□ 1.59
SNX3-202ENST00000349379 GAS7O60861 476 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 CKBP12277 381 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 PLCB4Q15147 1175 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 MIS18BP1Q6P0N0 1132 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 TRAF7Q6Q0C0 670 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 GJA10Q969M2 543 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.99■■□□□ 1.59
SNX3-202ENST00000349379 TEKT3Q9BXF9 490 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 PCDHA10Q9Y5I2 948 aa24.99■■□□□ 1.59
SNX3-202ENST00000349379 LOXHD1Q8IVV2 1947 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 WDR64B1ANS9 1081 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 RFC2P35250 354 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 PPFIA1Q13136 1202 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 SAFBQ15424 915 aaKnown RBP eCLIP24.98■■□□□ 1.59
SNX3-202ENST00000349379 FAM160B1Q5W0V3 765 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 PSRC1Q6PGN9 363 aaPredicted RBP24.98■■□□□ 1.59
SNX3-202ENST00000349379 RETREG2Q8NC44 543 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 UNC45AQ9H3U1 944 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 ZNF302Q9NR11 478 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 TCEAL9Q9UHQ7 104 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 MAFBQ9Y5Q3 323 aaPredicted RBP24.98■■□□□ 1.59
SNX3-202ENST00000349379 GBF1Q92538 1859 aa24.98■■□□□ 1.59
SNX3-202ENST00000349379 IGSF9BQ9UPX0 1349 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 MBLAC1A4D2B0 266 aaPredicted RBP24.97■■□□□ 1.59
SNX3-202ENST00000349379 SOX1O00570 391 aaPredicted RBP24.97■■□□□ 1.59
SNX3-202ENST00000349379 TBX3O15119 743 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 CCNT1O60563 726 aaKnown RBP24.97■■□□□ 1.59
SNX3-202ENST00000349379 ACRP10323 421 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 SELPP16109 830 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 ATP4AP20648 1035 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 GPNMBQ14956 572 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 GRIK4Q16099 956 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 MARCH8Q5T0T0 291 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 RASIP1Q5U651 963 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 LRRC8DQ7L1W4 858 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 RDM1Q8NG50 284 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 FAM20AQ96MK3 541 aa24.97■■□□□ 1.59
SNX3-202ENST00000349379 FOXP1Q9H334 677 aaPredicted RBP24.97■■□□□ 1.59
SNX3-202ENST00000349379 PTPRSQ13332 1948 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 BACH1O14867 736 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 PSAPP07602 524 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 PFKMP08237 780 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 INSRRP14616 1297 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 SFNP31947 248 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 SWSAP1Q6NVH7 229 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 ZNF365Q70YC5 407 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 RPUSD2Q8IZ73 545 aaKnown RBP24.96■■□□□ 1.59
SNX3-202ENST00000349379 HAS1Q92839 578 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 DISC1Q9NRI5 854 aa24.96■■□□□ 1.59
SNX3-202ENST00000349379 POTEB3A0JP26 581 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 RRN3P2A6NIE6 340 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 WNT7AO00755 349 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 CAND2O75155 1236 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 PARNO95453 639 aaKnown RBP24.95■■□□□ 1.58
SNX3-202ENST00000349379 JAK3P52333 1124 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 CUL4AQ13619 759 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 ZNF618Q5T7W0 954 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 PDXDC2PQ6P474 469 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 POTEBQ6S5H4 581 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 RPAINQ86UA6 219 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 POTEDQ86YR6 584 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 ATP8B4Q8TF62 1192 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 TNPO1Q92973 898 aaKnown RBP24.95■■□□□ 1.58
SNX3-202ENST00000349379 RNPC3Q96LT9 517 aaKnown RBP24.95■■□□□ 1.58
SNX3-202ENST00000349379 VAV3Q9UKW4 847 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 KIF3AQ9Y496 699 aa24.95■■□□□ 1.58
SNX3-202ENST00000349379 HBP1O60381 514 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 HERVK_113Q902F9 699 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 GABBR1Q9UBS5 961 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 TUBE1Q9UJT0 475 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 TRPC6Q9Y210 931 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 MICAL3Q7RTP6 2002 aa24.94■■□□□ 1.58
SNX3-202ENST00000349379 COL1A2P08123 1366 aa24.93■■□□□ 1.58
SNX3-202ENST00000349379 CXCL10P02778 98 aa24.93■■□□□ 1.58
SNX3-202ENST00000349379 GJB2P29033 226 aa24.93■■□□□ 1.58
SNX3-202ENST00000349379 PPP2R5CQ13362 524 aa24.93■■□□□ 1.58
SNX3-202ENST00000349379 TAF2Q6P1X5 1199 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms