RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 AGRPO00253 132 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 NDUFAB1O14561 156 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GCFC2P16383 781 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 ELF1P32519 619 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 SLC20A2Q08357 652 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 SLC39A2Q9NP94 309 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 MED4Q9NPJ6 270 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 EYA2O00167 538 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 HSPA1LP34931 641 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 UBASH3AP57075 661 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 KRT85P78386 507 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 DIS3L2Q8IYB7 885 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 IGDCC4Q8TDY8 1250 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 ARHGEF1Q92888 912 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 MOCOSQ96EN8 888 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 BAIAP2L1Q9UHR4 511 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 FBXO2Q9UK22 296 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 U3KPZ7 1027 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 LRP6O75581 1613 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CRYBG1Q9Y4K1 1723 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TCRBV5S4A2TA0A5A2 114 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 HIP1RO75146 1068 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 HNRNPCP07910 306 aaKnown RBP eCLIP3.95□□□□□ -1.78
GEN1-201ENST00000317402 CD1EP15812 388 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GPSM2P81274 684 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 USP17L6PQ6QN14 398 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TADA2BQ86TJ2 420 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 PNMA8AQ86V59 439 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 IFNL3Q8IZI9 196 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CACNA2D3Q8IZS8 1091 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 PRPF31Q8WWY3 499 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 ITFG2Q969R8 447 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 ANKIB1Q9P2G1 1089 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.95□□□□□ -1.782e-6■■■■□ 23.1
GEN1-201ENST00000317402 CACNA1AO00555 2505 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 BMP15O95972 392 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 P4HBP07237 508 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 PCYT1AP49585 367 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 DDB1Q16531 1140 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 MYSM1Q5VVJ2 828 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TCERG1LQ5VWI1 586 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 MDM1Q8TC05 714 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 USP33Q8TEY7 942 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 LRRC27Q9C0I9 530 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 DDX41Q9UJV9 622 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 NR2E3Q9Y5X4 410 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 C1orf167Q5SNV9 1468 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TOGARAM1Q9Y4F4 1720 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 COL22A1Q8NFW1 1626 aaPredicted RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 TCP10L2B9ZVM9 353 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 GTF2IP78347 998 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 NTRK3Q16288 839 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 NFRKBQ6P4R8 1299 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CCDC80Q76M96 950 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CRAMP1Q96RY5 1269 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 MPHOSPH8Q99549 860 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 JADE2Q9NQC1 790 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 XDHP47989 1333 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 IPO5O00410 1097 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 ATMINO43313 823 aaPredicted RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 BANF1O75531 89 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 RABGGTBP53611 331 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CTSWP56202 376 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 GSDMDP57764 484 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 IFFO1Q0D2I5 559 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 ZMYM1Q5SVZ6 1142 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 LRRC31Q6UY01 552 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 RDH13Q8NBN7 331 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 RAB3IL1Q8TBN0 382 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 HAUS1Q96CS2 278 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 HAUS7Q99871 368 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 TRIM31Q9BZY9 425 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 AKAP2Q9Y2D5 859 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 ZNF711Q9Y462 761 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 GREB1Q4ZG55 1949 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 CREB1P16220 341 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 MAP3K12Q12852 859 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 NPY5RQ15761 445 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 KIF4BQ2VIQ3 1234 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 TMEM63BQ5T3F8 832 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 SYDE2Q5VT97 1194 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 SLC30A9Q6PML9 568 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CCDC63Q8NA47 563 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 TDRD7Q8NHU6 1098 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 CYP2W1Q8TAV3 490 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 AIDAQ96BJ3 306 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 EIF3CQ99613 913 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 CCDC113Q9H0I3 377 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 MRGBPQ9NV56 204 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 C6orf229H3BNL8 230 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CTIFO43310 598 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 PFKFB2O60825 505 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 CASP4P49662 377 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 RPGRQ92834 1020 aaKnown RBP3.94□□□□□ -1.78
GEN1-201ENST00000317402 C8orf76Q96K31 380 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 PLXNB3Q9ULL4 1909 aa3.94□□□□□ -1.78
GEN1-201ENST00000317402 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms