RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 HTR3EA5X5Y0 456 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 BTNL10A8MVZ5 291 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 HMGB1P1B2RPK0 211 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ZBTB43O43298 467 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 BAG3O95817 575 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CD97P48960 835 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ALDH5A1P51649 535 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 USP11P51784 963 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SLC44A4Q53GD3 710 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 RALYLQ86SE5 291 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 FOXP4Q8IVH2 680 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF34Q8IZ26 560 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 LRRC43Q8N309 656 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ARHGAP18Q8N392 663 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CRACR2BQ8N4Y2 399 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 MREGQ8N565 214 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 WDR60Q8WVS4 1066 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 NCSTNQ92542 709 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CLMNQ96JQ2 1002 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ATP6V1G3Q96LB4 118 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 TCP11L1Q9NUJ3 509 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 RNF14Q9UBS8 474 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CHMP2BQ9UQN3 213 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PLIN4Q96Q06 1357 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 AKR1B10O60218 316 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PDGFRBP09619 1106 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ARPC4P59998 168 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PUM3Q15397 648 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SBK1Q52WX2 424 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 RUFY4Q6ZNE9 571 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 TRIM50Q86XT4 487 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 TBC1D10CQ8IV04 446 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 DEPTORQ8TB45 409 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CAVIN3Q969G5 261 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 MED15Q96RN5 788 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SUCLA2Q9P2R7 463 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SCOCQ9UIL1 159 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 TAF1LQ8IZX4 1826 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF233A6NK53 670 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PPP1R3GB7ZBB8 358 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 M0R2N6 131 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 GTPBP6O43824 516 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 LONP1P36776 959 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SH3BGRP55822 239 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CTSWP56202 376 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 MCCD1P59942 119 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 MCL1Q07820 350 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 SSRP1Q08945 709 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 TSR1Q2NL82 804 aaKnown RBP7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CCDC129Q6ZRS4 1044 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 CD302Q8IX05 232 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ANKK1Q8NFD2 765 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF507Q8TCN5 953 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 HAUS4Q9H6D7 363 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 ARFGEF1Q9Y6D6 1849 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 DYTNA2CJ06 578 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 hCG_1984214I3L0E3 225 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PJA2O43164 708 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PDE8BO95263 885 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ACADSP16219 412 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 IARSP41252 1262 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ATP11AP98196 1134 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PAK2Q13177 524 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ITGA7Q13683 1181 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ESCO1Q5FWF5 840 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CFAP157Q5JU67 520 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CFAP58Q5T655 872 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 IQCEQ6IPM2 695 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PDXDC2PQ6P474 469 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 LONP2Q86WA8 852 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PALB2Q86YC2 1186 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ZC3H3Q8IXZ2 948 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF713Q8N859 430 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 SNX27Q96L92 541 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CENPOQ9BU64 300 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ADAM22Q9P0K1 906 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF180Q9UJW8 692 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 FBXO9Q9UK97 447 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PCDHA5Q9Y5H7 936 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 SAR1BQ9Y6B6 198 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 H7C1D1 291 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 RBAK-RBAKDNI3L0D1 243 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 IFIT3O14879 490 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 GNA14O95837 355 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 IL6STP40189 918 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CABP4P57796 275 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 KCNJ2P63252 427 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 PDE4BQ07343 736 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 TRIM29Q14134 588 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 IRGCQ6NXR0 463 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 DUS1LQ6P1R4 473 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CYP26C1Q6V0L0 522 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 C3orf67Q6ZVT6 689 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CYB5R4Q7L1T6 521 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 CPLX4Q7Z7G2 160 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms