RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 AP3B2Q13367 1082 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TTLL12Q14166 644 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CEP55Q53EZ4 464 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 ZC2HC1CQ53FD0 456 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TTC19Q6DKK2 380 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 SRGAP1Q7Z6B7 1085 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 RABGGTAQ92696 567 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 PSMB7Q99436 277 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 REEP2Q9BRK0 252 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 NOC4LQ9BVI4 516 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 KCNH7Q9NS40 1196 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 MKI67P46013 3256 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 EPHB6O15197 1021 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 ATP9AO75110 1047 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TRIM21P19474 475 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 KRT9P35527 623 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 BEND6Q5SZJ8 279 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 FKBP1CQ5VVH2 108 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CNNM4Q6P4Q7 775 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 EEPD1Q7L9B9 569 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 OTOP1Q7RTM1 612 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 SMCR8Q8TEV9 937 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CCDC47Q96A33 483 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CLMNQ96JQ2 1002 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 SYT17Q9BSW7 474 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 MMRN2Q9H8L6 949 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 SPON1Q9HCB6 807 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 FOCADQ5VW36 1801 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CLIC2O15247 247 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 SLITRK3O94933 977 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 MYBP10242 640 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 BACE1P56817 501 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 FSTL1Q12841 308 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 GPS2Q13227 327 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 BAATQ14032 418 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 KCNB1Q14721 858 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 TMEM119Q4V9L6 283 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 SNRNP48Q6IEG0 339 aaKnown RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 UNC13DQ70J99 1090 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 SFR1Q86XK3 245 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 SLFN12Q8IYM2 578 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 RDH13Q8NBN7 331 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF280CQ8ND82 737 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 ANKRD20A12PQ8NF67 263 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 CLEC4DQ8WXI8 215 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 RMDN3Q96TC7 470 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 UNC45AQ9H3U1 944 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 SH2D4AQ9H788 454 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 VAV3Q9UKW4 847 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 LAMA2P24043 3122 aaKnown RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 LAMA3Q16787 3333 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 VWA5AO00534 786 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 MFAP3LO75121 409 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 FOSP01100 380 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 ICAM1P05362 532 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 LMNB1P20700 586 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 CCNE1P24864 410 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 MRPS9P82933 396 aaKnown RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 ARID5AQ03989 594 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 FAM26FQ5R3K3 315 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 UBXN6Q9BZV1 441 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 STK17AQ9UEE5 414 aa8.4□□□□□ -1.06
TRIM55-202ENST00000315962 RRP15Q9Y3B9 282 aaKnown RBP8.4□□□□□ -1.06
TRIM55-202ENST00000315962 CYP3A7-CYP3A51PA0A087WV96 503 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF185O15231 689 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 PLEKP08567 350 aaPredicted RBP8.4□□□□□ -1.07
TRIM55-202ENST00000315962 CYP3A7P24462 503 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 RPS12P25398 132 aaKnown RBP8.4□□□□□ -1.07
TRIM55-202ENST00000315962 NMT1P30419 496 aaKnown RBP8.4□□□□□ -1.07
TRIM55-202ENST00000315962 DNA2P51530 1060 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 SLC12A3P55017 1021 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 SOX10P56693 466 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 CASP8Q14790 479 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 TREML2Q5T2D2 321 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 MB21D1Q8N884 522 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 OTUD5Q96G74 571 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 KIAA1683Q9H0B3 1180 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 VPS33BQ9H267 617 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 CUEDC2Q9H467 287 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 CDC23Q9UJX2 597 aa8.4□□□□□ -1.07
TRIM55-202ENST00000315962 MYH7BA7E2Y1 1941 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE9A4FU28 777 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 GCNT3O95395 438 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 RPA1P27694 616 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 MATR3P43243 847 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM55-202ENST00000315962 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms