RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RPUSD2Q8IZ73 545 aaKnown RBP22.37■■□□□ 1.17
VEGFB-201ENST00000309422 TDHQ8IZJ6 230 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 AFAP1L1Q8TED9 768 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 MBOAT7Q96N66 472 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 DISC1Q9NRI5 854 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 RRN3P2A6NIE6 340 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 PARNO95453 639 aaKnown RBP22.36■■□□□ 1.17
VEGFB-201ENST00000309422 CCNE2O96020 404 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 ATP2B1P20020 1258 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 CYP2C18P33260 490 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 RFC2P35250 354 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 ORC2Q13416 577 aaPredicted RBP22.36■■□□□ 1.17
VEGFB-201ENST00000309422 CALCRLQ16602 461 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 TNFRSF25Q93038 417 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 CEP131Q9UPN4 1083 aa22.36■■□□□ 1.17
VEGFB-201ENST00000309422 POTEB3A0JP26 581 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 DHX15O43143 795 aaKnown RBP22.35■■□□□ 1.17
VEGFB-201ENST00000309422 SLC37A4O43826 429 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 DKC1O60832 514 aaKnown RBP eCLIP22.35■■□□□ 1.17
VEGFB-201ENST00000309422 PFKMP08237 780 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 TRAPPC10P48553 1259 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 CCL23P55773 120 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 GRIK4Q16099 956 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
VEGFB-201ENST00000309422 SWSAP1Q6NVH7 229 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 TAF2Q6P1X5 1199 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 POTEBQ6S5H4 581 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 ABHD15Q6UXT9 468 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 ETNPPLQ8TBG4 499 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 SETD4Q9NVD3 440 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 TUBE1Q9UJT0 475 aa22.35■■□□□ 1.17
VEGFB-201ENST00000309422 ATG7O95352 703 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 IGBP1P78318 339 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 LMBR1Q8WVP7 490 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 RNPEPQ9H4A4 650 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 GABBR1Q9UBS5 961 aa22.34■■□□□ 1.17
VEGFB-201ENST00000309422 MYH7BA7E2Y1 1941 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 DNAH12Q6ZR08 3092 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 FAM205CA6NFA0 338 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 HBP1O60381 514 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 CAND2O75155 1236 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 ACTN1P12814 892 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 SELPP16109 830 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 THPOP40225 353 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 EARS2Q5JPH6 523 aaKnown RBP22.33■■□□□ 1.17
VEGFB-201ENST00000309422 CCDC60Q8IWA6 550 aaPredicted RBP22.33■■□□□ 1.17
VEGFB-201ENST00000309422 ATP8B4Q8TF62 1192 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 UNC45AQ9H3U1 944 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 KCNMB3Q9NPA1 279 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 TELO2Q9Y4R8 837 aa22.33■■□□□ 1.17
VEGFB-201ENST00000309422 PSMD10O75832 226 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 CSF2RAP15509 400 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 MCM7P33993 719 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 CUL4AQ13619 759 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 LRRC8DQ7L1W4 858 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 BBXQ8WY36 941 aaPredicted RBP22.32■■□□□ 1.16
VEGFB-201ENST00000309422 SNX21Q969T3 373 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 INTS4Q96HW7 963 aaKnown RBP22.32■■□□□ 1.16
VEGFB-201ENST00000309422 IL23AQ9NPF7 189 aa22.32■■□□□ 1.16
VEGFB-201ENST00000309422 COL1A2P08123 1366 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 IGKV6D-21A0A0A0MT36 114 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 M0QZ92 97 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 ITGB8P26012 769 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 PLCB4Q15147 1175 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 TTC38Q5R3I4 469 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 SERINC5Q86VE9 423 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 RNPC3Q96LT9 517 aaKnown RBP22.31■■□□□ 1.16
VEGFB-201ENST00000309422 NRBP2Q9NSY0 501 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 IGSF9BQ9UPX0 1349 aa22.31■■□□□ 1.16
VEGFB-201ENST00000309422 VPS37CA5D8V6 355 aaPredicted RBP22.3■■□□□ 1.16
VEGFB-201ENST00000309422 TREHO43280 583 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 INSRRP14616 1297 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 PPP2R5CQ13362 524 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 TMEM266Q2M3C6 531 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 ZNF484Q5JVG2 852 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 HABP4Q5JVS0 413 aaKnown RBP22.3■■□□□ 1.16
VEGFB-201ENST00000309422 NCAPH2Q6IBW4 605 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 PCYT2Q99447 389 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 FTOQ9C0B1 505 aaKnown RBP eCLIP22.3■■□□□ 1.16
VEGFB-201ENST00000309422 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 UMODL1Q5DID0 1318 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
VEGFB-201ENST00000309422 IQCF3P0C7M6 154 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 CKBP12277 381 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.16
VEGFB-201ENST00000309422 HOXC8P31273 242 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 ZNF200P98182 395 aaPredicted RBP22.29■■□□□ 1.16
VEGFB-201ENST00000309422 RBL2Q08999 1139 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 RILPL1Q5EBL4 403 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
VEGFB-201ENST00000309422 GJA10Q969M2 543 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 SCLYQ96I15 445 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 CCDC43Q96MW1 224 aaKnown RBP22.29■■□□□ 1.16
VEGFB-201ENST00000309422 WNT8AQ9H1J5 351 aa22.29■■□□□ 1.16
VEGFB-201ENST00000309422 MAFBQ9Y5Q3 323 aaPredicted RBP22.29■■□□□ 1.16
VEGFB-201ENST00000309422 DOCK5Q9H7D0 1870 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 EDIL3O43854 480 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 OATP04181 439 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 PRKCEQ02156 737 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms