RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
LRPAP1-201ENST00000296325 NPAS4Q8IUM7 802 aa20.56■□□□□ 0.88
LRPAP1-201ENST00000296325 FAM227BQ96M60 508 aa20.56■□□□□ 0.88
LRPAP1-201ENST00000296325 ZNF215Q9UL58 517 aaPredicted RBP20.56■□□□□ 0.88
LRPAP1-201ENST00000296325 FRMPD4Q14CM0 1322 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 FSD2A1L4K1 749 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 MBLAC1A4D2B0 266 aaPredicted RBP20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 SPATA31C2B4DYI2 1134 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 PER2O15055 1255 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 NT5C2P49902 561 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 MRPS9P82933 396 aaKnown RBP20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 NEDD9Q14511 834 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 CYFIP1Q7L576 1253 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 CDCA3Q99618 268 aaPredicted RBP20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 VAT1LQ9HCJ6 419 aa20.55■□□□□ 0.88
LRPAP1-201ENST00000296325 CEP250Q9BV73 2442 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 PARP1P09874 1014 aaKnown RBP20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 UBE3AQ05086 875 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 KMT2BQ9UMN6 2715 aaPredicted RBP20.54■□□□□ 0.88
LRPAP1-201ENST00000296325 KAT6AQ92794 2004 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 CCDC178Q5BJE1 867 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 SYCE2Q6PIF2 218 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 UBALD2Q8IYN6 164 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 ENAHQ8N8S7 591 aaPredicted RBP20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 NKD2Q969F2 451 aaPredicted RBP20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 PCDHA1Q9Y5I3 950 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 CDY2AQ9Y6F7 541 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 SQORQ9Y6N5 450 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 DOCK5Q9H7D0 1870 aa20.53■□□□□ 0.88
LRPAP1-201ENST00000296325 MYO10Q9HD67 2058 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 FSCN2O14926 492 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 ZBTB5O15062 677 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 STAM2O75886 525 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 BRD1O95696 1058 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 CD52P31358 61 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 GNPTABQ3T906 1256 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 PAN2Q504Q3 1202 aaKnown RBP20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 MARCH8Q5T0T0 291 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 IQCA1Q86XH1 822 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 STAG2Q8N3U4 1231 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 KREMEN2Q8NCW0 462 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 RASGRP4Q8TDF6 673 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 FTHL17Q9BXU8 183 aa20.52■□□□□ 0.88
LRPAP1-201ENST00000296325 FIBPO43427 364 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 GATMP50440 423 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 UTP14CQ5TAP6 766 aaKnown RBP20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 TICAM2Q86XR7 235 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 ADSSL1Q8N142 457 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 DNAJB3Q8WWF6 145 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 SENP7Q9BQF6 1050 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 TUBE1Q9UJT0 475 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 SORCS3Q9UPU3 1222 aa20.51■□□□□ 0.87
LRPAP1-201ENST00000296325 GCOM1H8Y6P7 765 aaPredicted RBP20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 POLR2MP0CAP2 368 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 STAG3L1P0CL83 205 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 ERVFC1P60507 584 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 PPFIA1Q13136 1202 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 MTMR3Q13615 1198 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 SLC35G1Q2M3R5 365 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 ZBTB33Q86T24 672 aa20.5■□□□□ 0.87
LRPAP1-201ENST00000296325 PPFIA3O75145 1194 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 SCG2P13521 617 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 MRPS6P82932 125 aaKnown RBP20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 GRIK4Q16099 956 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 ASTLQ6HA08 431 aaPredicted RBP20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 FCHSD1Q86WN1 690 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 MICAL1Q8TDZ2 1067 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 ACACBO00763 2458 aa20.49■□□□□ 0.87
LRPAP1-201ENST00000296325 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
LRPAP1-201ENST00000296325 PADI3Q9ULW8 664 aa20.48■□□□□ 0.87
LRPAP1-201ENST00000296325 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
LRPAP1-201ENST00000296325 LAMA4Q16363 1823 aa20.48■□□□□ 0.87
LRPAP1-201ENST00000296325 OTOGLQ3ZCN5 2332 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 KLRF2D3W0D1 207 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 FGF18O76093 207 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 RPLP2P05387 115 aaKnown RBP20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 HOXB8P17481 243 aaPredicted RBP20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 SP100P23497 879 aaPredicted RBP20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 TCF7P36402 384 aaPredicted RBP20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 TECP42680 631 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 TMX1Q9H3N1 280 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 SMOC2Q9H3U7 446 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 ZSWIM5Q9P217 1185 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 MAD2L2Q9UI95 211 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 NR2E1Q9Y466 385 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 PCDHB12Q9Y5F1 795 aa20.47■□□□□ 0.87
LRPAP1-201ENST00000296325 FNDC1Q4ZHG4 1894 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms