RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 LRRC37A2A6NM11 1700 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 UQCRHLA0A096LP55 91 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 RSPH10B2B2RC85 870 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 RNF225M0QZC1 329 aaPredicted RBP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 ZSCAN12O43309 604 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 TBCAO75347 108 aaKnown RBP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 UQCRHP07919 91 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 RSPH10BP0C881 870 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 GTF2F1P35269 517 aaKnown RBP eCLIP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 CASP5P51878 434 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 FKBP3Q00688 224 aaKnown RBP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 PRKG1Q13976 671 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 BAATQ14032 418 aaPredicted RBP11.27□□□□□ -0.6
C9orf43-201ENST00000288462 EDRF1Q3B7T1 1238 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 DLK2Q6UY11 383 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 PIGOQ8TEQ8 1089 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 COL4A3BPQ9Y5P4 624 aa11.27□□□□□ -0.6
C9orf43-201ENST00000288462 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 TUBB4AP04350 444 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 ZNF131P52739 623 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 VWA3BQ502W6 1294 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 FIGNQ5HY92 759 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 MIER3Q7Z3K6 550 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 RETREG2Q8NC44 543 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 DNAJC7Q99615 494 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 ACAD9Q9H845 621 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 CSADQ9Y600 493 aa11.27□□□□□ -0.61
C9orf43-201ENST00000288462 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 LYPLA2O95372 231 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 CCND2P30279 289 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 HOXD13P35453 343 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 SYCP1Q15431 976 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 USP50Q70EL3 339 aaPredicted RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 NELFCDQ8IXH7 590 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 GPRASP2Q96D09 838 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 PURBQ96QR8 312 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 NUP58Q9BVL2 599 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ZHX3Q9H4I2 956 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ODF2LQ9ULJ1 636 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 TRAF3IP3Q9Y228 551 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 RASSF10A6NK89 507 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 PES1O00541 588 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 GNA14O95837 355 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 MYBP10242 640 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 MYCLP12524 364 aaPredicted RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 GUCY2CP25092 1073 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 KRT9P35527 623 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 IREB2P48200 963 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ERVK-24P63145 666 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 MTF1Q14872 753 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 TMTC1Q8IUR5 882 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 A1CFQ9NQ94 594 aaKnown RBP11.26□□□□□ -0.61
C9orf43-201ENST00000288462 CYP39A1Q9NYL5 469 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 SEL1LQ9UBV2 794 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
C9orf43-201ENST00000288462 UBE4BO95155 1302 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 TRAF5O00463 557 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
C9orf43-201ENST00000288462 ZBTB39O15060 712 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 FAM13AO94988 1023 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 KNOP1Q1ED39 458 aaKnown RBP11.25□□□□□ -0.61
C9orf43-201ENST00000288462 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
C9orf43-201ENST00000288462 CDCA5Q96FF9 252 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 FIZ1Q96SL8 496 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
C9orf43-201ENST00000288462 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 ZMYM2Q9UBW7 1377 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 ASTN1O14525 1302 aa11.25□□□□□ -0.61
C9orf43-201ENST00000288462 A0A0G2JLL6 359 aaPredicted RBP11.24□□□□□ -0.61
C9orf43-201ENST00000288462 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms