RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 DNAJB1P25685 340 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 NMIQ13287 307 aaPredicted RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 ADGRD2Q7Z7M1 963 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 ZNF589Q86UQ0 364 aaPredicted RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 ENAHQ8N8S7 591 aaPredicted RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 KLHL23Q8NBE8 558 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 MICAL1Q8TDZ2 1067 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 FTHL17Q9BXU8 183 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 TLE6Q9H808 572 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 BARX2Q9UMQ3 279 aaPredicted RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
SPC25-201ENST00000282074 TTC3P53804 2025 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 CFAP54Q96N23 3096 aa13.86□□□□□ -0.19
SPC25-201ENST00000282074 KAT6AQ92794 2004 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 H0Y858 1186 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 FIBPO43427 364 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 RPLP2P05387 115 aaKnown RBP13.85□□□□□ -0.19
SPC25-201ENST00000282074 VCPP55072 806 aaKnown RBP13.85□□□□□ -0.19
SPC25-201ENST00000282074 MGAT3Q09327 533 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 TSHZ1Q6ZSZ6 1077 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 NPAS4Q8IUM7 802 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
SPC25-201ENST00000282074 UBAC1Q9BSL1 405 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 ATG2AQ2TAZ0 1938 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
SPC25-201ENST00000282074 PROB1E7EW31 1015 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
SPC25-201ENST00000282074 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 ANKRD45Q5TZF3 282 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 RUFY4Q6ZNE9 571 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 STAG2Q8N3U4 1231 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 GIMAP8Q8ND71 665 aaPredicted RBP13.84□□□□□ -0.19
SPC25-201ENST00000282074 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
SPC25-201ENST00000282074 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 RTEL1Q9NZ71 1219 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
SPC25-201ENST00000282074 FAM186AA6NE01 2351 aa13.84□□□□□ -0.19
SPC25-201ENST00000282074 B4E1Z4 1266 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 GLP2RO95838 553 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 PDE1AP54750 535 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.19
SPC25-201ENST00000282074 SP4Q02446 784 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 UBE3AQ05086 875 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 PPFIA1Q13136 1202 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 IFIT1BQ5T764 474 aaKnown RBP13.83□□□□□ -0.19
SPC25-201ENST00000282074 IER5Q5VY09 327 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 HOMER1Q86YM7 354 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 DNAJB3Q8WWF6 145 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 RIPOR3Q96MK2 946 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 NEK1Q96PY6 1258 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 KRT23Q9C075 422 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 TUBE1Q9UJT0 475 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 SQORQ9Y6N5 450 aa13.83□□□□□ -0.19
SPC25-201ENST00000282074 M0QZ92 97 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 CD52P31358 61 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 GRIK4Q16099 956 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
SPC25-201ENST00000282074 PDE12Q6L8Q7 609 aaKnown RBP13.83□□□□□ -0.2
SPC25-201ENST00000282074 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 NLRX1Q86UT6 975 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 ATP8B4Q8TF62 1192 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 SUSD6Q92537 303 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 CNNM2Q9H8M5 875 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 ERAP1Q9NZ08 941 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 LRFN2Q9ULH4 789 aa13.83□□□□□ -0.2
SPC25-201ENST00000282074 KMT2EQ8IZD2 1858 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 MBLAC1A4D2B0 266 aaPredicted RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 PER2O15055 1255 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 SCG2P13521 617 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 MRPS6P82932 125 aaKnown RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 SPOUT1Q5T280 376 aaKnown RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 SEPT1Q8WYJ6 367 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 AGO3Q9H9G7 860 aaKnown RBP13.82□□□□□ -0.2
SPC25-201ENST00000282074 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
SPC25-201ENST00000282074 FRMPD4Q14CM0 1322 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms