RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
LSG1-201ENST00000265245 PDE2AO00408 941 aaPredicted RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 TBCAO75347 108 aaKnown RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 CIITAP33076 1130 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 RAPGEF1Q13905 1077 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 LENG9Q96B70 501 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 VPS18Q9P253 973 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 NOL4O94818 638 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 MMP14P50281 582 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 GIT2Q14161 759 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 KNOP1Q1ED39 458 aaKnown RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 CREG2Q8IUH2 290 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ANKRD13CQ8N6S4 541 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 REEP2Q9BRK0 252 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 VIPAS39Q9H9C1 493 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 MYH4Q9Y623 1939 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 MYH7BA7E2Y1 1941 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 SPATA31C1P0DKV0 1188 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 PSMC6P62333 389 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 CYP4A11Q02928 519 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ITIH3Q06033 890 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 KCNH2Q12809 1159 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 AOC3Q16853 763 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 ZC3H3Q8IXZ2 948 aaKnown RBP11.34□□□□□ -0.59
LSG1-201ENST00000265245 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 OSBPL9Q96SU4 736 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
LSG1-201ENST00000265245 CLGNO14967 610 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 MSH4O15457 936 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
LSG1-201ENST00000265245 C2orf54Q08AI8 447 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 C10orf67Q8IYJ2 551 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
LSG1-201ENST00000265245 TRAF3IP3Q9Y228 551 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 STAT2P52630 851 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 ARID5AQ03989 594 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 FRMD5Q7Z6J6 570 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 FAM71BQ8TC56 605 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 COG1Q8WTW3 980 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.33□□□□□ -0.6
LSG1-201ENST00000265245 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
LSG1-201ENST00000265245 PDXKO00764 312 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 TLR2O60603 784 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
LSG1-201ENST00000265245 CASP5P51878 434 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 ASIC2Q16515 512 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 SLC18A3Q16572 532 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 MMGT1Q8N4V1 131 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 SPATA4Q8NEY3 305 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 PSMB7Q99436 277 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 CALCOCO1Q9P1Z2 691 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
LSG1-201ENST00000265245 RABGAP1Q9Y3P9 1069 aa11.33□□□□□ -0.6
LSG1-201ENST00000265245 PIK3CDO00329 1044 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 BUB1O43683 1085 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 CYP3A4P08684 503 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 NFRKBQ6P4R8 1299 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 TBC1D5Q92609 795 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 SPAG5Q96R06 1193 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.6
LSG1-201ENST00000265245 PSD3Q9NYI0 1048 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 ZMYND10O75800 440 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 LMAN1P49257 510 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 ZNF572Q7Z3I7 529 aaPredicted RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 EIF2AK1Q9BQI3 630 aaKnown RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 METTL14Q9HCE5 456 aaKnown RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 AIPL1Q9NZN9 384 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 VAV3Q9UKW4 847 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 A0A1W2PRG0 241 aa11.32□□□□□ -0.6
LSG1-201ENST00000265245 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
LSG1-201ENST00000265245 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms