RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 WNK4Q96J92 1243 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 TUFT1Q9NNX1 390 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 PXMP2Q9NR77 195 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 PCDHA10Q9Y5I2 948 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 UQCRHLA0A096LP55 91 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 CCL15-CCL14A0A0B4J2E2 113 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 ZBTB39O15060 712 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 UQCRHP07919 91 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 XRCC5P13010 732 aaKnown RBP10.28□□□□□ -0.76
SSR3-201ENST00000265044 MARK3P27448 753 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 JAK3P52333 1124 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 HERVK_113P62684 666 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 LRRC63Q05C16 580 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 PPATQ06203 517 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 PGM5Q15124 567 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 CCL15Q16663 113 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 MIS18BP1Q6P0N0 1132 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 OTOP1Q7RTM1 612 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 MB21D1Q8N884 522 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 TAF1DQ9H5J8 278 aaPredicted RBP10.28□□□□□ -0.76
SSR3-201ENST00000265044 A1CFQ9NQ94 594 aaKnown RBP10.28□□□□□ -0.76
SSR3-201ENST00000265044 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
SSR3-201ENST00000265044 MYH8P13535 1937 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CYP3A7-CYP3A51PA0A087WV96 503 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 KIF2AO00139 706 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 ZNF500O60304 480 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 PGK2P07205 417 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CYP3A7P24462 503 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CIITAP33076 1130 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 PEX3P56589 373 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 HUNKP57058 714 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 TRIM14Q14142 442 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 MMP19Q99542 508 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 LUC7LQ9NQ29 371 aaKnown RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 JADE2Q9NQC1 790 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 RSPH10B2B2RC85 870 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CYP3A4P08684 503 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 RSPH10BP0C881 870 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ITGB5P18084 799 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 NMT1P30419 496 aaKnown RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 PSMC5P62195 406 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ECM1Q16610 540 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 PDCL3Q9H2J4 239 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 SLC9A2Q9UBY0 812 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CASZ1Q86V15 1759 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CXCL11O14625 94 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 IBSPP21815 317 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 YWHABP31946 246 aaKnown RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 SFNP31947 248 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 CYLC1P35663 651 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 NPEPPSP55786 919 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 DMP1Q13316 513 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 SYT10Q6XYQ8 523 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 SYT2Q8N9I0 419 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 OR8K1Q8NGG5 319 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 GBA2Q9HCG7 927 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.77
SSR3-201ENST00000265044 COL20A1Q9P218 1284 aa10.27□□□□□ -0.77
SSR3-201ENST00000265044 ABT1Q9ULW3 272 aaKnown RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 MORC2Q9Y6X9 1032 aaPredicted RBP10.27□□□□□ -0.77
SSR3-201ENST00000265044 LRRIQ4A6NIV6 560 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 GNA14O95837 355 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 CYP2C8P10632 490 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 PMS1P54277 932 aaKnown RBP10.26□□□□□ -0.77
SSR3-201ENST00000265044 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 METTL13Q8N6R0 699 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 ANKRD13CQ8N6S4 541 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 NEK9Q8TD19 979 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 SLC7A3Q8WY07 619 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 RUSC1Q9BVN2 902 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 GBP3Q9H0R5 595 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 NDST4Q9H3R1 872 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
SSR3-201ENST00000265044 AFG3L2Q9Y4W6 797 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 SNCAIPQ9Y6H5 919 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 SLITRK3O94933 977 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 IGBP1P78318 339 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
SSR3-201ENST00000265044 NUP58Q9BVL2 599 aa10.26□□□□□ -0.77
SSR3-201ENST00000265044 PITPNM2Q9BZ72 1349 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms