RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 PPP1R12AO14974 1030 aaPredicted RBP20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 DBN1Q16643 649 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 SIX6OS1Q8N1H7 587 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 OR6B3Q8NGW1 331 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 SPDL1Q96EA4 605 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 STK17AQ9UEE5 414 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 CDC26Q8NHZ8 85 aa20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 THOC1Q96FV9 657 aaKnown RBP20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 RPF1Q9H9Y2 349 aaKnown RBP20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 CPSF3Q9UKF6 684 aaKnown RBP20.2■□□□□ 0.82
SMARCC1-201ENST00000254480 ARL4AP40617 200 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 DHX9Q08211 1270 aaKnown RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 EXT2Q93063 718 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 RAB3IPQ96QF0 476 aaPredicted RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 AXIN2Q9Y2T1 843 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 SSTR3P32745 418 aaPredicted RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 PDZD8Q8NEN9 1154 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 NDST4Q9H3R1 872 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 IFT122Q9HBG6 1241 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 ZHX2Q9Y6X8 837 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 TYW5A2RUC4 315 aaKnown RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 PGRMC1O00264 195 aaKnown RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 SEPT2Q15019 361 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 PCDHA6Q9UN73 950 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 PCDHA8Q9Y5H6 950 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 TOM1L1O75674 476 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 S100BP04271 92 aaPredicted RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 MAP7Q14244 749 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 RWDD4Q6NW29 188 aaKnown RBP20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 DSTYKQ6XUX3 929 aa20.19■□□□□ 0.82
SMARCC1-201ENST00000254480 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 CCNE1P24864 410 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 PFDN6O15212 129 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 MSH2P43246 934 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 PNMA2Q9UL42 364 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 FAN1Q9Y2M0 1017 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 PRPSAP2O60256 369 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 KRT31Q15323 416 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 BBS9Q3SYG4 887 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 KIF3CO14782 793 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 KRT3P12035 628 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 MINPP1Q9UNW1 487 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 IKBKBO14920 756 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 SART1O43290 800 aaKnown RBP20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 KDM6BO15054 1643 aa20.18■□□□□ 0.82
SMARCC1-201ENST00000254480 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 COA1Q9GZY4 146 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 E9PMD0 336 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 HIP1RO75146 1068 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 MYO1EQ12965 1108 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 PPP6R3Q5H9R7 873 aaPredicted RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 NGRNQ9NPE2 291 aaKnown RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 H7C1W4 665 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 FAM133BQ5BKY9 247 aaKnown RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 SCYL3Q8IZE3 742 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 SPATA17Q96L03 361 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 HP1BP3Q5SSJ5 553 aaPredicted RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 WRNIP1Q96S55 665 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 NDUFA10O95299 355 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 CUL4AQ13619 759 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 IQCB1Q15051 598 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 DACT3Q96B18 629 aaPredicted RBP20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
SMARCC1-201ENST00000254480 TOB2Q14106 344 aaPredicted RBP20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 HEMGNQ9BXL5 484 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 BAG5Q9UL15 447 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 SRGAP2O75044 1071 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 MX2P20592 715 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 STAT3P40763 770 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 IL9RQ01113 521 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 ECE2O60344 883 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 CDC25BP30305 580 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 MTMR1Q13613 665 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 THOC5Q13769 683 aaKnown RBP20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 CATSPER4Q7RTX7 472 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 SLITRK6Q9H5Y7 841 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 SERPING1P05155 500 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 TMC4Q7Z404 712 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 CDHR1Q96JP9 859 aa20.16■□□□□ 0.82
SMARCC1-201ENST00000254480 ACSL3O95573 720 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 GBP5Q96PP8 586 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 PRKAG2Q9UGJ0 569 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 MED7O43513 233 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 SRGAP2BP0DMP2 458 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 TTC30AQ86WT1 665 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 VSTM4Q8IW00 320 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 BBS5Q8N3I7 341 aa20.15■□□□□ 0.82
SMARCC1-201ENST00000254480 RABGGTAQ92696 567 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms