RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 USP20Q9Y2K6 914 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 H0Y3Z8 333 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 LMNAP02545 664 aaKnown RBP14.14□□□□□ -0.15
MSH2-201ENST00000233146 KPNB1Q14974 876 aaKnown RBP14.14□□□□□ -0.15
MSH2-201ENST00000233146 DDB1Q16531 1140 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 USH1GQ495M9 461 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 FIGNQ5HY92 759 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 OLFML1Q6UWY5 402 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 ATP11CQ8NB49 1132 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 DHRS1Q96LJ7 313 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 AGBL1Q96MI9 1066 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 TXLNGYQ9BZA5 131 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 TXLNGQ9NUQ3 528 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 EXOC1Q9NV70 894 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
MSH2-201ENST00000233146 PEAK1Q9H792 1746 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 MON2Q7Z3U7 1717 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 NWD2Q9ULI1 1742 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 MAGEA1P43355 309 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 IFNAR2P48551 515 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 HPCAP84074 193 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 TTC8Q8TAM2 541 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 RSPH1Q8WYR4 309 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 IRGQQ8WZA9 623 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 FGFR1OP2Q9NVK5 253 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 C3P01024 1663 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 BUB1O43683 1085 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 RAD21O60216 631 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 HOXD12P35452 270 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 CD97P48960 835 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 METAP2P50579 478 aaKnown RBP eCLIP14.13□□□□□ -0.15
MSH2-201ENST00000233146 ADCY1Q08828 1119 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 CNGA2Q16280 664 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 NTRK3Q16288 839 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 PKN1Q16512 942 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 GSTA3Q16772 222 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 TNNI3KQ59H18 835 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 SCFD2Q8WU76 684 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 UTP6Q9NYH9 597 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 LARSQ9P2J5 1176 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 RPL26L1Q9UNX3 145 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 DAAM1Q9Y4D1 1078 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 FPGT-TNNI3KV9GXZ4 949 aa14.13□□□□□ -0.15
MSH2-201ENST00000233146 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 RNASE9P60153 205 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 SCG3Q8WXD2 468 aaKnown RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 NR1H4Q96RI1 486 aaPredicted RBP14.13□□□□□ -0.15
MSH2-201ENST00000233146 UTYO14607 1347 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 MAST3O60307 1309 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 XDHP47989 1333 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 CATSPER2Q96P56 530 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 MPHOSPH6Q99547 160 aaKnown RBP14.12□□□□□ -0.15
MSH2-201ENST00000233146 TBC1D7Q9P0N9 293 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 ATP8A1Q9Y2Q0 1164 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 RANBP6O60518 1105 aaKnown RBP14.12□□□□□ -0.15
MSH2-201ENST00000233146 ATP5HO75947 161 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 NUDT17P0C025 328 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 PRCPP42785 496 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 PSMD7P51665 324 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 MGAT5Q09328 741 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 INF2Q27J81 1249 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 RC3H1Q5TC82 1133 aaKnown RBP14.12□□□□□ -0.15
MSH2-201ENST00000233146 MEI1Q5TIA1 1274 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 IL17REQ8NFR9 667 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 LRRC8CQ8TDW0 803 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 STAMQ92783 540 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 UBAC1Q9BSL1 405 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 TMEM247A6NEH6 219 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 MMP1P03956 469 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 ETS2P15036 469 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 MLH1P40692 756 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 RTP1P59025 263 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 IFI35P80217 286 aaPredicted RBP14.12□□□□□ -0.15
MSH2-201ENST00000233146 GSTM4Q03013 218 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 SNX30Q5VWJ9 437 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 NRG4Q8WWG1 115 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 SEC14L1Q92503 715 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 SMC6Q96SB8 1091 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 CENPKQ9BS16 269 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 BLZF1Q9H2G9 400 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 EPB41L4BQ9H329 900 aa14.12□□□□□ -0.15
MSH2-201ENST00000233146 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 TRIM49BA6NDI0 452 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 DAPK3O43293 454 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 ENTPD5O75356 428 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 LYNP07948 512 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 GPSM2P81274 684 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms