RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PARD6BQ9BYG5 372 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ANXA13P27216 316 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ZBED6P86452 979 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 TCP11Q8WWU5 503 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 OSBP2Q969R2 916 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 EXOC1LA0A1B0GW35 172 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 SNAP25P60880 206 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 NNTQ13423 1086 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 DYNLL2Q96FJ2 89 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 AP1M1Q9BXS5 423 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 CCNE1P24864 410 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 LTKP29376 864 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 PEX19P40855 299 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 CDC37Q16543 378 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 RPF1Q9H9Y2 349 aaKnown RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 TXLNGQ9NUQ3 528 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ART3Q13508 389 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 CUL4AQ13619 759 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 SURF1Q15526 300 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 AIFM3Q96NN9 605 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 WDR91A4D1P6 747 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 NCF2P19878 526 aaPredicted RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 SOX5P35711 763 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 HSPH1Q92598 858 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 OLA1Q9NTK5 396 aaKnown RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 AATKQ6ZMQ8 1374 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ATP7BP35670 1465 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 BBOX1O75936 387 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 NDUFA10O95299 355 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 CCDC138Q96M89 665 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ABCF3Q9NUQ8 709 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ZSWIM5Q9P217 1185 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 CSPG5O95196 566 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 PI4KBQ9UBF8 816 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ALCAMQ13740 583 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ARHGEF6Q15052 776 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ZMYND12Q9H0C1 365 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 NOVA2Q9UNW9 492 aaKnown RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 PNMA6FA0A0J9YX94 578 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 CLCN6P51797 869 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 CCDC124Q96CT7 223 aaKnown RBP12.44□□□□□ -0.42
LAMA4-201ENST00000230538 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 ZWILCHQ9H900 591 aa12.44□□□□□ -0.42
LAMA4-201ENST00000230538 SHROOM2Q13796 1616 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 IFNAR1P17181 557 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 EPHB1P54762 984 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ARMCX2Q7L311 632 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 FMO2Q99518 471 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MSTO1Q9BUK6 570 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 IRAK4Q9NWZ3 460 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ZBED1O96006 694 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ESRRGP62508 458 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
LAMA4-201ENST00000230538 KRT82Q9NSB4 513 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 TRPA1O75762 1119 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 LRRC63Q05C16 580 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ARL13BQ3SXY8 428 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 BBS9Q3SYG4 887 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ALS2CLQ60I27 953 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 G3BP2Q9UN86 482 aaKnown RBP12.43□□□□□ -0.42
LAMA4-201ENST00000230538 WDR64B1ANS9 1081 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 ZNF18P17022 549 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms