RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 FBXO18Q8NFZ0 1043 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 ATP6V0A1Q93050 837 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 MYH9P35579 1960 aaKnown RBP14.34□□□□□ -0.11
LSM5-201ENST00000223084 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 CHMP2AO43633 222 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PSMD10O75832 226 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 HOXC8P31273 242 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 KRT76Q01546 638 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PTK7Q13308 1070 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.113e-8■□□□□ 9.9
LSM5-201ENST00000223084 BFSP2Q13515 415 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSM5-201ENST00000223084 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
LSM5-201ENST00000223084 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 ZNF746Q6NUN9 644 aaPredicted RBP14.34□□□□□ -0.11
LSM5-201ENST00000223084 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 ZBTB10Q96DT7 871 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 RIT2Q99578 217 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 TEKT3Q9BXF9 490 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 UNC45AQ9H3U1 944 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
LSM5-201ENST00000223084 TET1Q8NFU7 2136 aa14.33□□□□□ -0.11
LSM5-201ENST00000223084 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
LSM5-201ENST00000223084 GJB2P29033 226 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 IGBP1P78318 339 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 ADAM17P78536 824 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 GRIK4Q16099 956 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 TRMT1LQ7Z2T5 733 aaKnown RBP14.33□□□□□ -0.12
LSM5-201ENST00000223084 SERINC5Q86VE9 423 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 VWCEQ96DN2 955 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.12
LSM5-201ENST00000223084 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 DISC1Q9NRI5 854 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 PCDHA10Q9Y5I2 948 aa14.33□□□□□ -0.12
LSM5-201ENST00000223084 A0A1W2PPC1 479 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 SOX1O00570 391 aaPredicted RBP14.32□□□□□ -0.12
LSM5-201ENST00000223084 PSAPP07602 524 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 GNAT1P11488 350 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 CKBP12277 381 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 INSRRP14616 1297 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 ATP4AP20648 1035 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 TMEM240Q5SV17 173 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 DEFB128Q7Z7B8 93 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
LSM5-201ENST00000223084 CCDC155Q8N6L0 562 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 AFAP1L1Q8TED9 768 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 TRAPPC12Q8WVT3 735 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 HAS1Q92839 578 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 NAP1L4Q99733 375 aaKnown RBP14.32□□□□□ -0.12
LSM5-201ENST00000223084 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
LSM5-201ENST00000223084 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 GABBR1Q9UBS5 961 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 SMC3Q9UQE7 1217 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 NRCAMQ92823 1304 aa14.32□□□□□ -0.12
LSM5-201ENST00000223084 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 WDR64B1ANS9 1081 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 EML1O00423 815 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 MARCH6O60337 910 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 SELPP16109 830 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 THPOP40225 353 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 CUL4AQ13619 759 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
LSM5-201ENST00000223084 GPNMBQ14956 572 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 UGCGQ16739 394 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 MARCH8Q5T0T0 291 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 ZNF618Q5T7W0 954 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 TRAF7Q6Q0C0 670 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 B3GNT9Q6UX72 402 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 LRRC8DQ7L1W4 858 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 FAM20AQ96MK3 541 aa14.31□□□□□ -0.12
LSM5-201ENST00000223084 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.31□□□□□ -0.12
LSM5-201ENST00000223084 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
LSM5-201ENST00000223084 TANC1Q9C0D5 1861 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 JAK3P52333 1124 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 RBL2Q08999 1139 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms