RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PDZD4Q76G19 769 aaPredicted RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 NFE2L3Q9Y4A8 694 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 NR2F2P24468 414 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 EVCP57679 992 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 VEPH1Q14D04 833 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 RASEFQ8IZ41 740 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 PTK2Q05397 1052 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 DGKDQ16760 1214 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 PTF1AQ7RTS3 328 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 CCDC89Q8N998 374 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 BEST2Q8NFU1 509 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 USP28Q96RU2 1077 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 TSGA10Q9BZW7 698 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 POLR3FQ9H1D9 316 aaPredicted RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 FOXP1Q9H334 677 aaPredicted RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 MAP3K20Q9NYL2 800 aaKnown RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 GTPBP6O43824 516 aaPredicted RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 MAPK4P31152 587 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 PAN2Q504Q3 1202 aaKnown RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 TNS2Q63HR2 1409 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 IPO5O00410 1097 aaKnown RBP14.96□□□□□ -0.01
SIX4-201ENST00000216513 INPP5BP32019 993 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 MGARPQ8TDB4 240 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 AFG3L2Q9Y4W6 797 aa14.96□□□□□ -0.01
SIX4-201ENST00000216513 PFASO15067 1338 aa14.96□□□□□ -0.02
SIX4-201ENST00000216513 GSG1L2A8MUP6 293 aa14.96□□□□□ -0.02
SIX4-201ENST00000216513 ABCD1P33897 745 aa14.96□□□□□ -0.02
SIX4-201ENST00000216513 PSMC2P35998 433 aaKnown RBP14.96□□□□□ -0.02
SIX4-201ENST00000216513 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.02
SIX4-201ENST00000216513 TMEM39AQ9NV64 488 aa14.96□□□□□ -0.02
SIX4-201ENST00000216513 ZNF233A6NK53 670 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 TMTC3Q6ZXV5 915 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 SYNDIG1Q9H7V2 258 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 TMEM88BA6NKF7 163 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 C2CD2LO14523 706 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 MFAP3P55082 362 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 FAM186BQ8IYM0 893 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 NLGN2Q8NFZ4 835 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 AIFM3Q96NN9 605 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 DDR1Q08345 913 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 PAK2Q13177 524 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 TTC19Q6DKK2 380 aaPredicted RBP14.95□□□□□ -0.02
SIX4-201ENST00000216513 ATG9AQ7Z3C6 839 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 NEDD1Q8NHV4 660 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 PFDN4Q9NQP4 134 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 GJB4Q9NTQ9 266 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 RNF8O76064 485 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 NLRP12P59046 1061 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 RAB20Q9NX57 234 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 SFNP31947 248 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 SLFN12LQ6IEE8 588 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 OR6B2Q6IFH4 312 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
SIX4-201ENST00000216513 SLC16A4O15374 487 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 MMP1P03956 469 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 NSFP46459 744 aaKnown RBP14.94□□□□□ -0.02
SIX4-201ENST00000216513 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 MICALCLQ6ZW33 695 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 AGBL1Q96MI9 1066 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 NUP58Q9BVL2 599 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 METTL14Q9HCE5 456 aaKnown RBP14.94□□□□□ -0.02
SIX4-201ENST00000216513 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 NEMP1O14524 444 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 VPS41P49754 854 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 KRT17Q04695 432 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 MORC3Q14149 939 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 GIPC1O14908 333 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 SURF1Q15526 300 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 GDAP1Q8TB36 358 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 COL5A2P05997 1499 aaPredicted RBP14.94□□□□□ -0.02
SIX4-201ENST00000216513 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 POLR2FP61218 127 aaKnown RBP14.94□□□□□ -0.02
SIX4-201ENST00000216513 CYP27A1Q02318 531 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 GRM4Q14833 912 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 MTMR4Q9NYA4 1195 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 PRRG1O14668 218 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 CIITAP33076 1130 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 ITIH3Q06033 890 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 CCDC6Q16204 474 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 FBF1Q8TES7 1133 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 AK8Q96MA6 479 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.94□□□□□ -0.02
SIX4-201ENST00000216513 SMARCAD1Q9H4L7 1026 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 ENTPD7Q9NQZ7 604 aa14.94□□□□□ -0.02
SIX4-201ENST00000216513 IQGAP1P46940 1657 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 POTEB3A0JP26 581 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 DYNC1I1O14576 645 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 RECQLP46063 649 aaPredicted RBP14.93□□□□□ -0.02
SIX4-201ENST00000216513 POTEBQ6S5H4 581 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 RSAD2Q8WXG1 361 aa14.93□□□□□ -0.02
SIX4-201ENST00000216513 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.02
SIX4-201ENST00000216513 SUCLA2Q9P2R7 463 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms