RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Pgrmc1O55022 195 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gm4981Q3ULJ8 291 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ppp4r1Q8K2V1 951 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 GrapQ9CX99 217 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Vstm4T1NXB5 319 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Nck2O55033 380 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rab20P35295 233 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gpc4P51655 557 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Srek1ip1Q4V9W2 153 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Pex19Q8VCI5 299 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Prpf3Q922U1 683 aaKnown RBP17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gins2Q9D600 185 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 CatspereP0DP43 985 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 GmpsQ3THK7 693 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Prr7Q3V0I2 269 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gngt2Q61017 69 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Enox1Q8BHR2 643 aaKnown RBP17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Terb1Q8C0V1 768 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Lmbrd1Q8K0B2 537 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gpsm2Q8VDU0 679 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mtfr1lQ9CWE0 289 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tmem47Q9JJG6 181 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ttc41Q692V3 1318 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Pik3r1P26450 724 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Palb2Q3U0P1 1104 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Slc4a7Q8BTY2 1034 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mb21d2Q8C525 428 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Lsm14bQ8CGC4 385 aaKnown RBP17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Utp11Q9CZJ1 253 aaKnown RBP17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rmi1Q9D4G9 616 aa17.28■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Apol6B7ZC55 329 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 C1qbpO35658 278 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Xxylt1Q3U4G3 392 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Sval3Q76I99 144 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Lnx1O70263 728 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ccdc153P0C7Q1 202 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cd72P21855 354 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Fkbp1aP26883 108 aaKnown RBP17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tfdp1Q08639 410 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Epc1Q8C9X6 813 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Q8R1Y2 203 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Spon1Q8VCC9 807 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 GdaQ9R111 454 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 HpdP49429 393 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tbc1d1Q60949 1255 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Adat2Q6P6J0 191 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cttnbp2nlQ99LJ0 638 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Kcnq5Q9JK45 933 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Myo1cQ9WTI7 1063 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gfpt2Q9Z2Z9 682 aa17.27■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gna14P30677 355 aa17.27■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Sox5P35710 763 aa17.27■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cyp26b1Q811W2 512 aa17.27■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Myo5cE9Q1F5 1742 aa17.27■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 FcgrtQ61559 365 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Anapc5Q8BTZ4 740 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Slc39a11Q8BWY7 342 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Trex1Q91XB0 314 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Fem1bQ9Z2G0 627 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cfap221A9Q751 836 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Dnaaf5B9EJR8 853 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Tex13cD3YU32 604 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cyth3O08967 399 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Atg9aQ68FE2 551 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 4933409G03RikQ8C5U0 320 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pde6bP23440 856 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Tgfb2P27090 414 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mmp20P57748 482 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Syne3Q4FZC9 975 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ppp1r13bQ62415 1087 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Anks1bQ8BIZ1 1259 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Polr2bQ8CFI7 1174 aaKnown RBP17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ankrd63A2ARS0 390 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 ErmardE9Q048 622 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Krt78E9Q0F0 1068 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Scg2Q03517 617 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ddx19bQ8BZY3 494 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Snrnp35Q9D384 244 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gm3414Q3TNU4 584 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gm14685Q52KH6 695 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 F13a1Q8BH61 732 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Tcp11l2Q8K1H7 517 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Dppa3Q8QZY3 150 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Psmg1Q9JK23 289 aa17.26■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Lrriq4A6H6A4 596 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Zbtb41Q811F1 908 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Fam49aQ8BHZ0 323 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pomgnt1Q91X88 660 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Coa7Q921H9 231 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Apopt1Q9CQW7 192 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 4932429P05RikA2ADI4 785 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Fam81aQ3UXZ6 364 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Satb1Q60611 764 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ppp2r5dQ91V89 594 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ino80Q6ZPV2 1559 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ccnyl1D3YUJ3 367 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Slc3a2P10852 526 aaKnown RBP17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cyp2d11P24457 504 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Adcy7P51829 1099 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Snai1Q02085 264 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms