RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Nfxl1E9Q8I7 918 aaKnown RBP9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Phldb3E9QAF4 648 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Zfp275G3X904 499 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ets2P15037 468 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gna15P30678 374 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 AdkP55264 361 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 NogP97466 232 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Proser2Q8C5R2 471 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem63cQ8CBX0 802 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cdk8Q8R3L8 464 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Thoc1Q8R3N6 657 aaKnown RBP9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mettl13Q91YR5 698 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rpf2Q9JJ80 306 aaKnown RBP9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sept6Q9R1T4 434 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tns2Q8CGB6 1400 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm5936A2BG95 728 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm5640A3KG49 728 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cd3dP04235 173 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 RaraP11416 462 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ifnar1P33896 590 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Irf6P97431 467 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mapk6Q61532 720 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cep85Q8BMK0 761 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rbm41Q8JZV4 413 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 AdpgkQ8VDL4 496 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Q9CYI0 393 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rsph3bQ9DA80 389 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Itga9B8JK39 1036 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 IkbkbO88351 757 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 P4hbP09103 509 aaKnown RBP9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Pde6aP27664 859 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 MaeaQ4VC33 396 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Otop3Q80UF9 577 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ccdc28aQ8CEI3 192 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Taco1Q8K0Z7 294 aaKnown RBP9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Armcx6Q8K3A6 301 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tekt2Q922G7 430 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Stk39Q9Z1W9 556 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 C5P06684 1680 aa9.57□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lrriq4A6H6A4 596 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ddx23D3Z0M9 819 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tada2bD3Z4Z0 420 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mroh9G5E8L9 891 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cyp2d34L7N463 504 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Trappc3O55013 180 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 CidebO70303 219 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 MycP01108 439 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Stmn2P55821 179 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Armc2Q3URY6 854 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Krt14Q61781 484 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dnajc8Q6NZB0 253 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Chmp2bQ8BJF9 213 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 N4bp3Q8C7U1 537 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Klhl20Q8VCK5 604 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Igf2bp3Q9CPN8 579 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 EhhadhQ9DBM2 718 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fmnl1Q9JL26 1094 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 HnrnpcQ9Z204 313 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Apol7aB2RT54 418 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Maml3D4QGC2 1135 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm3893E9Q1I1 302 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Csf1rP09581 977 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Zfp42P22227 288 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sept2P42208 361 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 LtbrP50284 415 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Hsd17b1P51656 344 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 S100a5P63084 93 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tcerg1lQ3B807 590 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gja3Q64448 417 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tpp2Q64514 1262 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Wdr35Q8BND3 1181 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Clec4gQ8BNX1 294 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Commd10Q8JZY2 202 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Hs2st1Q8R3H7 356 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Abhd2Q9QXM0 425 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lgr5Q9Z1P4 907 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 JcadQ5DTX6 1320 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 LdhbP16125 334 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rps6ka3P18654 740 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mmp20P57748 482 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Skap1Q3UUV5 355 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ccdc92bQ5SUE3 299 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mks1Q5SW45 561 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rps6ka6Q7TPS0 764 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem39bQ810L4 492 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Usp20Q8C6M1 916 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rpa1Q8VEE4 623 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ccdc65Q8VHI7 493 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ttll1Q91V51 423 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fgd4Q91ZT5 766 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Arpp21Q9DCB4 807 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cabp5Q9JLK3 173 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 ThegQ9JMB1 375 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Prkab1Q9R078 270 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Atp6v1g2Q9WTT4 118 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Snx1Q9WV80 522 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 GsdmeQ9Z2D3 512 aa9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nup153E9Q3G8 1462 aaKnown RBP9.56□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fam47eD3YWC7 402 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm38392E9Q2A2 434 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms