RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Atg13Q91YI1 516 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cwh43Q91YL7 699 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Q9CYI0 393 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tfcp2Q9ERA0 502 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Nudt5Q9JKX6 218 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cnpy2Q9QXT0 182 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 TriobpQ99KW3 2014 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Jbts17Q8CE72 3214 aa13.83□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm38392E9Q2A2 434 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Tap2P36371 702 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Irf3P70671 419 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Nfe2Q07279 373 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 KhsrpQ3U0V1 748 aaKnown RBP13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Slc9a1Q61165 820 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Kif5bQ61768 963 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gemin4Q6P6L6 1058 aaKnown RBP13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Zbtb5Q7TQG0 670 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Eml3Q8VC03 897 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Nrbp2Q91V36 499 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Pdzd3Q99MJ6 498 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ranbp17Q99NF8 1088 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 VasnQ9CZT5 673 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Slc15a2Q9ES07 729 aa13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Wdr46Q9Z0H1 622 aaKnown RBP13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 AdnpQ9Z103 1108 aaKnown RBP13.83□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Col6a3E9PWQ3 3284 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ccdc183A2AJB1 534 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Mpp3O88910 568 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Lmntd2Q0VET5 664 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Carmil2Q3V3V9 1296 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Vps72Q62481 368 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Nap1l4Q78ZA7 375 aaKnown RBP13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Amer1Q7TS75 1132 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Sh3tc2Q80VA5 1289 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Slc2a12Q8BFW9 622 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Wdr11Q8K1X1 1223 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 SdsQ8VBT2 327 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Rnf186Q9D241 226 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Etnk1Q9D4V0 363 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Drc3Q9D5E4 523 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Hip1rQ9JKY5 1068 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 BcamQ9R069 622 aa13.82□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ccdc188F6WEU2 249 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 ProcP33587 460 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Aldh2P47738 519 aaKnown RBP13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 EvcP57680 1005 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Pcif1P59114 706 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 RenbpP82343 430 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Fam89aQ14BJ1 175 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Echdc2Q3TLP5 296 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Lrrfip1Q3UZ39 729 aaKnown RBP13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gas7Q60780 421 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Srd5a1Q68FF9 255 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Dusp11Q6NXK5 321 aaKnown RBP13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Krt9Q6RHW0 743 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Smarcal1Q8BJL0 910 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Mknk2Q8CDB0 459 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Olfr397Q8VEZ6 315 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Adam33Q923W9 797 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 GhdcQ99J23 532 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Mageb3Q9D2H4 330 aa13.81□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Kdelc2G5E897 503 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Barx2O08686 283 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Pcdha4O88689 947 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 ChgaP26339 463 aaKnown RBP13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Bmpr1aP36895 532 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ccr1P51675 355 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Grxcr1Q50H32 290 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Celf4Q7TSY6 486 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Kcnj14Q8JZN3 434 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Med24Q99K74 987 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Themis3Q9CU24 569 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ccdc7Q9D541 371 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Lmbr1Q9JIT0 490 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ccnt1Q9QWV9 724 aaKnown RBP13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Sept3Q9Z1S5 350 aa13.8□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Cyp4a29A0A087WPC3 509 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gm5737A0A140LI11 423 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Igkv10-96A0A140T8M1 115 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Klhl34A2AI76 644 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gm6133B2RY53 190 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gm3164L7N2B9 238 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gm3264L7N2C5 238 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Scp2P32020 547 aaKnown RBP13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ifnar1P33896 590 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Etv6P97360 485 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Lrrc36Q3V0M2 755 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Krt87Q6IMF0 495 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Nsun6Q7TS68 476 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Susd6Q8BGE4 302 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Dph6Q9CQ28 267 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 CenpsQ9D084 142 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Arpp21Q9DCB4 807 aa13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Rfc2Q9WUK4 349 aaKnown RBP13.79□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ptchd4B9EKX1 904 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Clec11aO88200 328 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Bmp8aP34821 399 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Slc9a2Q3ZAS0 814 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ppp2r5cQ60996 524 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 PtprcapQ64697 197 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms