RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Scfd1Q8BRF7 639 aaKnown RBP11.18□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pcdha11Q91Y19 950 aa11.18□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Dcun1d1Q9QZ73 259 aa11.18□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Scnn1bQ9WU38 638 aa11.18□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Krt80Q0VBK2 452 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Fam83bQ0VBM2 1012 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ccdc151Q8BSN3 593 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Vmp1Q99KU0 406 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gngt1Q61012 74 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Hoxa13Q62424 386 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Acap3Q6NXL5 833 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Dsg3O35902 993 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Sec23ipQ6NZC7 998 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 PigsQ6PD26 555 aaKnown RBP11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Med15Q924H2 789 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Castor1Q9CWQ8 331 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Nup50Q9JIH2 466 aaKnown RBP11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 BicraF8VPZ9 1578 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Dnaaf5B9EJR8 853 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Acad11Q80XL6 779 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tmem132bF7BAB2 1078 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Casp8O89110 480 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Sept2P42208 361 aaKnown RBP11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tlr7P58681 1050 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Q14AM7 275 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 NfkbibQ60778 359 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ophn1Q99J31 802 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Carmil3Q3UFQ8 1375 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rabgap1lA6H6A9 815 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Fkbp8O35465 402 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Wdr93Q402B2 695 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gm5936A2BG95 728 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gm5640A3KG49 728 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Nccrp1G3X9C2 266 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ect2Q07139 913 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Dis3l2Q8CI75 870 aaKnown RBP11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 4931423N10RikQ9D4J9 382 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Dnajc12Q9R022 198 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 M1apQ9Z0E1 529 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pfkfb1P70266 471 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Frat1P70339 274 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Mark2Q05512 776 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Bola3Q8CEI1 110 aa11.17□□□□□ -0.62
Scn9a-201ENSMUST00000100063 AV320801A2AWL3 467 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gm15023L7MUB4 467 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Foxred2Q3USW5 665 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tmed1Q3V009 227 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Islr2Q5RKR3 745 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Mybpc2Q5XKE0 1136 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ripor2Q80U16 1078 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rnf168Q80XJ2 565 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ccdc50Q810U5 305 aaKnown RBP11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Q8BZJ8 459 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rusc2Q80U22 1514 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Zbtb1Q91VL9 713 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Erp44Q9D1Q6 406 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Trmt1lA2RSY6 728 aaKnown RBP11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pgrmc1O55022 195 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 TpbpaP13438 124 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ncoa4Q5U4H9 625 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Slc38a7Q8BWH0 463 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Phka2Q8BWJ3 1235 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 OplahQ8K010 1288 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pacsin2Q9WVE8 486 aaKnown RBP11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Cpsf2O35218 782 aaKnown RBP11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Psen2Q61144 448 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rpap2Q8VC34 614 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Bloc1s4Q8VED2 215 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Znf654Q9DAU9 571 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Cul1Q9WTX6 776 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Rfx8D3YU81 596 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 LrmpQ60664 539 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Them6Q80ZW2 207 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Cog3Q8CI04 820 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Aldh18a1Q9Z110 795 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Abcc12Q80WJ6 1366 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Nid2O88322 1403 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gm28961A0A087WPA5 222 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Gm21858A0A087WQ24 222 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 CrkQ64010 304 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Mylk2Q8VCR8 613 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ubn2Q80WC1 1314 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Twf1Q91YR1 350 aaKnown RBP11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 KynuQ9CXF0 464 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 PxdnQ3UQ28 1475 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Clcn1Q64347 994 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Pnpla2Q8BJ56 486 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ifi205aQ8CGE8 404 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Art3Q8R2G4 371 aa11.16□□□□□ -0.62
Scn9a-201ENSMUST00000100063 LmnaP48678 665 aaKnown RBP11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ccdc160Q3UYG1 323 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Meis1Q60954 390 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Tbc1d30Q69ZT9 766 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Usp6nlQ80XC3 819 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 PolrmtQ8BKF1 1207 aaKnown RBP11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Znf445Q8R2V3 986 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Ushbp1Q8R370 680 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Slc30a5Q8R4H9 761 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Cttnbp2nlQ99LJ0 638 aa11.15□□□□□ -0.62
Scn9a-201ENSMUST00000100063 Xpo4Q9ESJ0 1151 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms