RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Cntnap4Q99P47 1310 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Entpd2O55026 495 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Prss36Q5K2P8 849 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Satb1Q60611 764 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Nrg1Q6DR99 700 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 GypcQ78HU7 95 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Tor4aQ8BH02 426 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fmnl1Q9JL26 1094 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 CtsfQ9R013 462 aa12.46□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Cdh23Q99PF4 3354 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 MtrA6H5Y3 1253 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Zc3h7bF8VPP8 982 aaKnown RBP12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Dsg3O35902 993 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Hoxb8P09632 243 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Stat5aP42230 793 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Meis2P97367 477 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Bahd1Q497V6 772 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Celf4Q7TSY6 486 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Epha10Q8BYG9 1007 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Usp44Q8C2S0 711 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Zbtb21E9Q444 1094 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm3164L7N2B9 238 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm3264L7N2C5 238 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Lta4hP24527 611 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Cd22P35329 862 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ptpn5P54830 541 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 1700010I14RikQ7TPG0 532 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 PigoQ9JJI6 1093 aa12.45□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Rab11fip2G3XA57 512 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ppef2O35385 757 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fam198aQ3UY90 562 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Znf652Q5DU09 608 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 PkdccQ5RJI4 492 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 G2e3Q5RJY2 716 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Nr2e1Q64104 385 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gpd2Q64521 727 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Wdr44Q6NVE8 915 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Znf365Q8BG89 408 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Slc38a9Q8BGD6 560 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ano1Q8BHY3 960 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 LRWD1Q8BUI3 648 aaKnown RBP12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 N4bp3Q8C7U1 537 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 9230110C19RikQ8CC70 267 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Dnttip2Q8R2M2 758 aaKnown RBP12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Armcx1Q9CX83 456 aa12.44□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Cacna1hO88427 2365 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Wnt6P22727 364 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Tap2P36371 702 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Nfe2Q07279 373 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Oog4Q4G0C7 502 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Igf2bp2Q5SF07 592 aaKnown RBP12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Lrrc15Q80X72 579 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Kremen2Q8K1S7 461 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Lmbr1Q9JIT0 490 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Rlbp1Q9Z275 317 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Igkv10-96A0A140T8M1 115 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 FosP01101 380 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Pde6aP27664 859 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Pkn1P70268 946 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm3414Q3TNU4 584 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm29609Q3UU56 907 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Kpna1Q60960 538 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Antxr2Q6DFX2 487 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gtf3c2Q8BL74 907 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ago3Q8CJF9 860 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Bhmt2Q91WS4 363 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Mdm1Q9D067 708 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 DmtnQ9WV69 405 aa12.43□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 TrioQ0KL02 3102 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Kcnb2A6H8H5 907 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Arhgap4B1AUY3 965 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Lamp2P17047 415 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gfpt1P47856 697 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Xxylt1Q3U4G3 392 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Rhpn1Q61085 643 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Atp11bQ6DFW5 1175 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fsd1Q7TPM6 496 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Nipa1Q8BHK1 323 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fbxo44Q8BK26 255 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ftsj1Q8CBC7 324 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Pla2g2fQ9QZT4 168 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Nlrp5Q9R1M5 1163 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Mbd3Q9Z2D8 285 aaKnown RBP12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Suclg2Q9Z2I8 433 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Dnah12Q3V0Q1 3086 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Vmn2r55G3UWZ4 781 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Vmn2r53L7N473 806 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 MafgO54790 162 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Uimc1Q5U5Q9 727 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Sestd1Q80UK0 696 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Kcnv2Q8CFS6 562 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Fam129bQ8R1F1 749 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 B3galt6Q91Z92 325 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Git2Q9JLQ2 708 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 TfebQ9R210 475 aa12.42□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Gm11549A0A286YD83 63 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Ptchd4B9EKX1 904 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Atp9aO70228 1047 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Akap3O88987 864 aa12.41□□□□□ -0.42
Ccdc60-202ENSMUST00000086483 Casp14O89094 257 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms