RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Gimap4Q99JY3 219 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Ndufb9Q9CQJ8 179 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Cul1Q9WTX6 776 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Q3KNL4 93 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Krt26Q3TRJ4 462 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Krt40Q6IFX3 439 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Sept10Q8C650 452 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Rpap2Q8VC34 614 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Snx24Q9CRB0 169 aa18.65■□□□□ 0.58
Usp48-201ENSMUST00000055131 Scg2Q03517 617 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Sin3bQ62141 1098 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Sec23ipQ6NZC7 998 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Trim17Q7TPM3 477 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Tnni1Q9WUZ5 187 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rpf1Q7TND5 349 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Gnl3Q8CI11 538 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ints9Q8K114 658 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Usp15Q8R5H1 981 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Kiaa1551Q5DTW7 1521 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 JrklB2RRL2 523 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Pja1O55176 578 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Stmn1P54227 149 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Qrich1Q3UA37 777 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ccdc84Q4VA36 332 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rsad1Q5SUV1 442 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Amhr2Q8K592 568 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Thap2Q9D305 217 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Stk32bQ9JJX8 414 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Veph1A1A535 833 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Krt36B1AQ75 473 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Acad12D3Z7X0 555 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Cyp11b1Q3TG86 501 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ccdc85aQ5SP85 500 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Pcdhb14Q6PB90 796 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Tcp10aQ80W76 438 aa18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Twf2Q9Z0P5 349 aaKnown RBP18.64■□□□□ 0.57
Usp48-201ENSMUST00000055131 Stat4P42228 749 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 4933409G03RikQ8C5U0 320 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Fbxo41Q6NS60 873 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 MtbpQ8BJS8 894 aaKnown RBP18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 EgfrQ01279 1210 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Usp50Q6P8X6 390 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Baiap3Q80TT2 1134 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Inpp5fQ8CDA1 1132 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Serpina9Q9D7D2 418 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rtl9Q32KG4 1339 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Vmn2r23E9PXI5 849 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 SftpbP50405 377 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Gucy2cQ3UWA6 1072 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Tns3Q5SSZ5 1440 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Git1Q68FF6 770 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 NfrkbQ6PIJ4 1296 aaKnown RBP18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Zbtb41Q811F1 908 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Fbxo18Q8K2I9 1042 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rfc4Q99J62 364 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Cdk5rap3Q99LM2 503 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Krt10P02535 570 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Tbc1d1Q60949 1255 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Zfp341Q6PGC9 846 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Impg2Q80XH2 1243 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 LRWD1Q8BUI3 648 aaKnown RBP18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Cpsf3Q9QXK7 684 aa18.63■□□□□ 0.57
Usp48-201ENSMUST00000055131 Pfkfb3A7UAK5 555 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Apol7bB1AQP7 369 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Sec31aQ3UPL0 1230 aaKnown RBP18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Senp6Q6P7W0 1132 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 AmphQ7TQF7 686 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Lyve1Q8BHC0 318 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 AbraQ8BUZ1 375 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ccdc97Q9DBT3 340 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rtn3Q9ES97 964 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Gm7168A0AUV4 508 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 CatspereP0DP43 985 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 NyxP83503 476 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Morc2bQ8C5W4 1022 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Rfx6Q8C7R7 927 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Sucla2Q9Z2I9 463 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Trim5E9PV98 497 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Gnl1P36916 607 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Kiaa0319Q5SZV5 1081 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Dcaf15Q6PFH3 600 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Pdik1lQ8QZR7 341 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Slc12a6Q924N4 1150 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 MajinQ9D992 256 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Vmn2r79E9Q067 851 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Aco1P28271 889 aaKnown RBP18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Sema3eP70275 775 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 FcgrtQ61559 365 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Klc4Q9DBS5 619 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 Arl6ip4Q9JM93 229 aa18.62■□□□□ 0.57
Usp48-201ENSMUST00000055131 AlcamQ61490 583 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Itih3Q61704 889 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Q80Y73 168 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ranbp17Q99NF8 1088 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Mrpl11Q9CQF0 192 aaKnown RBP18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Arhgef7Q9ES28 862 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Tmem47Q9JJG6 181 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Ext2P70428 718 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Hipk4Q3V016 616 aa18.61■□□□□ 0.57
Usp48-201ENSMUST00000055131 Map3k7Q62073 579 aa18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms