RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	FHN1	P53279	174 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	DIA1	P54005	336 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	SNA4	Q07549	140 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	PAM18	Q07914	168 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	YER175W-A	Q8TGU4	54 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	RHO1	P06780	209 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	CDC33	P07260	213 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	TUB1	P09733	447 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	MET16	P18408	261 aa	Predicted RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	CMK2	P22517	447 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	PTC6	P25646	442 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	RPF2	P36160	344 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	OLA1	P38219	394 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	RTC3	P38804	111 aa	Predicted RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	ARO9	P38840	513 aa	Predicted RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	LNP1	P38878	278 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	SEC72	P39742	193 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	HXT9	P40885	567 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	HXT11	P54862	567 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	SPP2	Q02521	185 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	YFT2	Q06676	274 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	SHS1	Q07657	551 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	PEX27	Q08580	376 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	RIO1	Q12196	484 aa	Known RBP	5.73	□□□□□ -1.49
TFB4	YPR056W	YDR262W	Q12331	272 aa		5.73	□□□□□ -1.49
TFB4	YPR056W	AAC1	P04710	309 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	GPH1	P06738	902 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	PET494	P07390	489 aa	Predicted RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	HEM1	P09950	548 aa	Predicted RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	RPL27A	P0C2H6	136 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	RPL27B	P0C2H7	136 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	GPI12	P23797	304 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	YSP3	P25036	478 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	ELO2	P25358	347 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	BMH1	P29311	267 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	PPZ2	P33329	710 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	AAP1	P37898	856 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	RTC2	P38279	296 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	POP7	P38291	140 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	SDH8	P38345	138 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	MMS21	P38632	267 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	UIP3	P39547	235 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	YEL020C	P39994	560 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	YAR1	P46683	200 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	YGL108C	P53139	140 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	SLX9	P53251	210 aa	Predicted RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	SPC98	P53540	846 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	ATG4	P53867	494 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	LGE1	Q02796	332 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	SPC2	Q04969	178 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	COQ9	Q05779	260 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	GMC2	Q06201	188 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	POS5	Q06892	414 aa		5.72	□□□□□ -1.49
TFB4	YPR056W	DNL4	Q08387	944 aa	Predicted RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	YRA1	Q12159	226 aa	Known RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	PRP46	Q12417	451 aa	Predicted RBP	5.72	□□□□□ -1.49
TFB4	YPR056W	COX2	P00410	251 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	COX3	P00420	269 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	NFT1	P0CE68	1218 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	RPL35A	P0CX84	120 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	RPL35B	P0CX85	120 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	CBF1	P17106	351 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	RPL24B	P24000	155 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	FEN2	P25621	512 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	CSM1	P25651	190 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	RPS5	P26783	225 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	ADE1	P27616	306 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	KRE2	P27809	442 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	DEG1	P31115	442 aa	Known RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	DOA1	P36037	715 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	DUG2	P38149	878 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	LDB7	P38210	180 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	ICS2	P38284	255 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SBE22	P38814	852 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SPC97	P38863	823 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	FET3	P38993	636 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	ELO1	P39540	310 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	BDH2	P39713	417 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	YIL001W	P40560	513 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SPG5	P42933	373 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SNZ3	P43545	298 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	PTR3	P43606	678 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	TAX4	P47030	604 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	STE24	P47154	453 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	DIP5	P53388	608 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SSU72	P53538	206 aa	Predicted RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	SNZ2	P53824	298 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	APM1	Q00776	475 aa	Predicted RBP	5.71	□□□□□ -1.5
TFB4	YPR056W	SHR3	Q02774	210 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	COQ11	Q05892	277 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	SYO1	Q07395	620 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	CYK3	Q07533	885 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	YPL216W	Q08964	1102 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	INP53	Q12271	1107 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	ZPS1	Q12512	249 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	UBA3	Q99344	299 aa		5.71	□□□□□ -1.5
TFB4	YPR056W	BNR1	P40450	1375 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	RPN13	O13563	156 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	RPL18A	P0CX49	186 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	RPL18B	P0CX50	186 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms