RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	CTF13	P35203	478 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YPT52	P36018	234 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	AHP1	P38013	176 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	WSC4	P38739	605 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	AVT6	P40074	448 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	RIO2	P40160	425 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	ALK1	P43633	760 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	GUF1	P46943	645 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	DOT1	Q04089	582 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	DYN3	Q04949	312 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	HOF1	Q05080	669 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	PAL1	Q05518	499 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	PDR8	Q06149	701 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MCH5	Q08777	521 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YOR283W	Q12040	230 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	VIK1	Q12045	647 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MLH3	Q12083	715 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ATG34	Q12292	412 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MHF2	Q3E829	80 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ARG3	P05150	338 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	TRP4	P07285	380 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	UNG1	P12887	359 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	GLN4	P13188	809 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	MNE1	P24720	663 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MF(ALPHA)2	P32435	120 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	COT1	P32798	439 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	CSE2	P33308	149 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	SPO23	P33757	523 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	OAF3	P36023	863 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YKR015C	P36111	568 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	KAE1	P36132	386 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MRPL15	P36523	253 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MCM7	P38132	845 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	VID24	P38263	362 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	TDA11	P38854	504 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MET30	P39014	640 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ARF3	P40994	183 aa	RIP-Chip data	1.44	□□□□□ -2.18	not detected
SSK2	YNR031C	BPL1	P48445	690 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	YDL186W	P48568	277 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	LSG1	P53145	640 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	ISU1	Q03020	165 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	DFG5	Q05031	458 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	BOP2	Q06150	570 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	SFH1	Q06168	426 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MHR1	Q06630	226 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	SNX3	Q08826	162 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	NCA2	Q12374	616 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	EAF3	Q12432	401 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ARG4	P04076	463 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	GAL80	P04387	435 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YFR010W-A	P0C5N0	62 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ARO3	P14843	370 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	TUP1	P16649	713 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	RNA14	P25298	677 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	ADH7	P25377	361 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	UBC8	P28263	218 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	PDB1	P32473	366 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	DUT1	P33317	147 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	LHP1	P33399	275 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	MTH1	P35198	433 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	MAE1	P36013	669 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	SUL1	P38359	859 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	OSH7	P38755	437 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	DHH1	P39517	506 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	CDC40	P40968	455 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	DIM1	P41819	318 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	LOH1	P47055	219 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ILM1	P47155	203 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YJR141W	P47172	347 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	KAP114	P53067	1004 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	SCW11	P53189	542 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ERP6	P53198	216 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	SWC4	P53201	476 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	NOP19	P53317	196 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	HST3	P53687	447 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	CPR8	P53728	308 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	TDA7	P53882	636 aa	Predicted RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	MMT1	Q03218	510 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	VHS1	Q03785	461 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	RBS1	Q05672	457 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	MSC3	Q05812	728 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YLR446W	Q06204	433 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YPD1	Q07688	167 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	ENT4	Q07872	247 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	HNT3	Q08702	217 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	FRE5	Q08908	694 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	LYS21	Q12122	440 aa	Known RBP	1.44	□□□□□ -2.18
SSK2	YNR031C	SKS1	Q12505	502 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	YNL162W-A	Q3E7A8	72 aa		1.44	□□□□□ -2.18
SSK2	YNR031C	QCR7	P00128	127 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	ERG20	P08524	352 aa	Known RBP	1.43	□□□□□ -2.18
SSK2	YNR031C	TUB1	P09733	447 aa	Known RBP	1.43	□□□□□ -2.18
SSK2	YNR031C	AMD2	P22580	549 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	ARG1	P22768	420 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	YCR007C	P25354	239 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	EMC1	P25574	760 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	CWP1	P28319	239 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	PRO3	P32263	286 aa	Known RBP	1.43	□□□□□ -2.18
SSK2	YNR031C	KAP122	P32767	1081 aa		1.43	□□□□□ -2.18
SSK2	YNR031C	GDH2	P33327	1092 aa	Known RBP	1.43	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms