RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C SPT10P35208 640 aa2.96□□□□□ -1.94
SSN8YNL025C YPT52P36018 234 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C RPF2P36160 344 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C MRPL10P36520 322 aa2.96□□□□□ -1.94
SSN8YNL025C YMC2P38087 329 aa2.96□□□□□ -1.94
SSN8YNL025C SPP381P38282 291 aaPredicted RBP2.96□□□□□ -1.94
SSN8YNL025C MMS21P38632 267 aa2.96□□□□□ -1.94
SSN8YNL025C STN1P38960 494 aa2.96□□□□□ -1.94
SSN8YNL025C ALP1P38971 573 aa2.96□□□□□ -1.94
SSN8YNL025C PRP39P39682 629 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C PIG2P40187 538 aa2.96□□□□□ -1.94
SSN8YNL025C YIL001WP40560 513 aa2.96□□□□□ -1.94
SSN8YNL025C PAC11P40960 533 aa2.96□□□□□ -1.94
SSN8YNL025C SCD6P45978 349 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SSN8YNL025C HIT1P46973 164 aa2.96□□□□□ -1.94
SSN8YNL025C TMA22P47089 198 aaPredicted RBP2.96□□□□□ -1.94
SSN8YNL025C MIG2P53035 382 aa2.96□□□□□ -1.94
SSN8YNL025C KAP114P53067 1004 aa2.96□□□□□ -1.94
SSN8YNL025C KRE28Q04431 385 aa2.96□□□□□ -1.94
SSN8YNL025C CTS2Q06350 511 aa2.96□□□□□ -1.94
SSN8YNL025C ARR2Q06597 130 aa2.96□□□□□ -1.94
SSN8YNL025C SYO1Q07395 620 aa2.96□□□□□ -1.94
SSN8YNL025C SDO1Q07953 250 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C SMC5Q08204 1093 aa2.96□□□□□ -1.94
SSN8YNL025C CRT10Q08226 957 aa2.96□□□□□ -1.94
SSN8YNL025C YOL075CQ08234 1294 aa2.96□□□□□ -1.94
SSN8YNL025C PEX27Q08580 376 aa2.96□□□□□ -1.94
SSN8YNL025C YOR389WQ08912 624 aa2.96□□□□□ -1.94
SSN8YNL025C TGS1Q12052 315 aa2.96□□□□□ -1.94
SSN8YNL025C DAP1Q12091 152 aa2.96□□□□□ -1.94
SSN8YNL025C INP53Q12271 1107 aa2.96□□□□□ -1.94
SSN8YNL025C PAA1Q12447 191 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C YER175W-AQ8TGU4 54 aa2.96□□□□□ -1.94
SSN8YNL025C ECM3Q99252 613 aa2.96□□□□□ -1.94
SSN8YNL025C SGS1P35187 1447 aa2.95□□□□□ -1.94
SSN8YNL025C YLL053CP0CD98 152 aa2.95□□□□□ -1.94
SSN8YNL025C TCP1P12612 559 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C SEN2P16658 377 aa2.95□□□□□ -1.94
SSN8YNL025C STE18P18852 110 aa2.95□□□□□ -1.94
SSN8YNL025C KGD2P19262 463 aaPredicted RBP2.95□□□□□ -1.94
SSN8YNL025C DAL82P21705 255 aa2.95□□□□□ -1.94
SSN8YNL025C RBK1P25332 333 aa2.95□□□□□ -1.94
SSN8YNL025C SAT4P25333 603 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C KRE2P27809 442 aa2.95□□□□□ -1.94
SSN8YNL025C GAC1P28006 793 aa2.95□□□□□ -1.94
SSN8YNL025C CWP1P28319 239 aa2.95□□□□□ -1.94
SSN8YNL025C PSO2P30620 661 aa2.95□□□□□ -1.94
SSN8YNL025C BCS1P32839 456 aa2.95□□□□□ -1.94
SSN8YNL025C DOA1P36037 715 aa2.95□□□□□ -1.94
SSN8YNL025C NTR2P36118 322 aaPredicted RBP2.95□□□□□ -1.94
SSN8YNL025C RTC2P38279 296 aa2.95□□□□□ -1.94
SSN8YNL025C SDH8P38345 138 aa2.95□□□□□ -1.94
SSN8YNL025C RTC3P38804 111 aaPredicted RBP2.95□□□□□ -1.94
SSN8YNL025C YHR210CP38893 341 aa2.95□□□□□ -1.94
SSN8YNL025C CIN4P39110 191 aa2.95□□□□□ -1.94
SSN8YNL025C FHL1P39521 936 aa2.95□□□□□ -1.94
SSN8YNL025C ELO1P39540 310 aa2.95□□□□□ -1.94
SSN8YNL025C UTP25P40498 721 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C SNL1P40548 159 aa2.95□□□□□ -1.94
SSN8YNL025C SPG5P42933 373 aa2.95□□□□□ -1.94
SSN8YNL025C TOS3P43637 560 aa2.95□□□□□ -1.94
SSN8YNL025C NPA3P47122 385 aa2.95□□□□□ -1.94
SSN8YNL025C STE24P47154 453 aa2.95□□□□□ -1.94
SSN8YNL025C BIO3P50277 480 aa2.95□□□□□ -1.94
SSN8YNL025C YGR151CP53287 111 aa2.95□□□□□ -1.94
SSN8YNL025C DIA1P54005 336 aa2.95□□□□□ -1.94
SSN8YNL025C SHR3Q02774 210 aa2.95□□□□□ -1.94
SSN8YNL025C ENT5Q03769 411 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C ECM11Q04110 302 aa2.95□□□□□ -1.94
SSN8YNL025C UFO1Q04511 668 aa2.95□□□□□ -1.94
SSN8YNL025C GMC2Q06201 188 aa2.95□□□□□ -1.94
SSN8YNL025C ABP140Q08641 628 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C RAX1Q08760 435 aa2.95□□□□□ -1.94
SSN8YNL025C RIO1Q12196 484 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C PRS5Q12265 496 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C RMD5Q12508 421 aa2.95□□□□□ -1.94
SSN8YNL025C RRP12Q12754 1228 aaKnown RBP2.95□□□□□ -1.94
SSN8YNL025C TEF1P02994 458 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C RPL18AP0CX49 186 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C RPL18BP0CX50 186 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C RPS16AP0CX51 143 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C RPS16BP0CX52 143 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C POL30P15873 258 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C MRPL8P22353 238 aa2.94□□□□□ -1.94
SSN8YNL025C SGV1P23293 657 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C PTP1P25044 335 aa2.94□□□□□ -1.94
SSN8YNL025C PUT3P25502 979 aaPredicted RBP2.94□□□□□ -1.94
SSN8YNL025C CSM1P25651 190 aa2.94□□□□□ -1.94
SSN8YNL025C GSY2P27472 705 aa2.94□□□□□ -1.94
SSN8YNL025C FRE1P32791 686 aa2.94□□□□□ -1.94
SSN8YNL025C HES1P35843 434 aa2.94□□□□□ -1.94
SSN8YNL025C SNU114P36048 1008 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C MNN2P38069 597 aa2.94□□□□□ -1.94
SSN8YNL025C DUG2P38149 878 aa2.94□□□□□ -1.94
SSN8YNL025C CTP1P38152 299 aa2.94□□□□□ -1.94
SSN8YNL025C YHR122WP38829 231 aa2.94□□□□□ -1.94
SSN8YNL025C PCF11P39081 626 aaPredicted RBP2.94□□□□□ -1.94
SSN8YNL025C PRM9P39551 298 aa2.94□□□□□ -1.94
SSN8YNL025C LAS21P40367 830 aa2.94□□□□□ -1.94
SSN8YNL025C SWP82P43554 623 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms