RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	EPL1	P43572	832 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	PHB2	P50085	310 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	TOF1	P53840	1238 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	IBD2	P53892	351 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	MMT1	Q03218	510 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	YMR181C	Q03231	154 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	YFH1	Q07540	174 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	SRL2	Q12020	392 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	YDR061W	Q12298	539 aa		4.23	□□□□□ -1.73
CUS1	YMR240C	CDC21	P06785	304 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	CHS1	P08004	1131 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CUS1	YMR240C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CUS1	YMR240C	RRP1	P35178	278 aa	Predicted RBP	4.22	□□□□□ -1.73
CUS1	YMR240C	MIX23	P38162	196 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	SNM1	P40993	198 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	ASN2	P49090	572 aa	Known RBP	4.22	□□□□□ -1.73
CUS1	YMR240C	ROG1	P53118	685 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	YDR286C	Q05530	114 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	RRP9	Q06506	573 aa	Known RBP	4.22	□□□□□ -1.73
CUS1	YMR240C	CUE5	Q08412	411 aa	Known RBP	4.22	□□□□□ -1.73
CUS1	YMR240C	PGC1	Q08959	321 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	PPT2	Q12036	173 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	RRP12	Q12754	1228 aa	Known RBP	4.22	□□□□□ -1.73
CUS1	YMR240C	SRN2	Q99176	213 aa		4.22	□□□□□ -1.73
CUS1	YMR240C	GDH1	P07262	454 aa	Known RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	DST1	P07273	309 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	DAP2	P18962	818 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	PHO84	P25297	587 aa	Known RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	SPS22	P25380	463 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	KKQ8	P36004	724 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	ADH5	P38113	351 aa	Known RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	QDR3	P38227	689 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	FAA2	P39518	744 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	YAT2	P40017	923 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	PAC11	P40960	533 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	IDP2	P41939	412 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	ATP22	P50273	684 aa	Predicted RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	MSO1	P53604	210 aa	Known RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	STD1	Q02794	444 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	IPK1	Q06667	281 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.21	□□□□□ -1.73
CUS1	YMR240C	YBR298C-A	Q8TGK4	73 aa		4.21	□□□□□ -1.73
CUS1	YMR240C	NFT1	P0CE68	1218 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	KRR1	P25586	316 aa	Predicted RBP	4.21	□□□□□ -1.74
CUS1	YMR240C	MRP4	P32902	394 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	NAT2	P37293	288 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	YBR056W	P38081	501 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	STP2	P38704	541 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	YER079W	P40052	210 aa	Known RBP	4.21	□□□□□ -1.74
CUS1	YMR240C	WSC2	P53832	503 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	THP3	Q12049	470 aa	Known RBP	4.21	□□□□□ -1.74
CUS1	YMR240C	TIP41	Q12199	356 aa		4.21	□□□□□ -1.74
CUS1	YMR240C	CPR1	P14832	162 aa	Known RBP	4.2	□□□□□ -1.74
CUS1	YMR240C	UIP5	P36137	443 aa		4.2	□□□□□ -1.74
CUS1	YMR240C	YBP1	P38315	674 aa		4.2	□□□□□ -1.74
CUS1	YMR240C	MKT1	P40850	830 aa	Known RBP	4.2	□□□□□ -1.74
CUS1	YMR240C	CHS6	P40955	746 aa		4.2	□□□□□ -1.74
CUS1	YMR240C	OST1	P41543	476 aa	Known RBP	4.2	□□□□□ -1.74
CUS1	YMR240C	BTN2	P53286	410 aa		4.2	□□□□□ -1.74
CUS1	YMR240C	PRP3	Q03338	469 aa	Predicted RBP	4.2	□□□□□ -1.74
CUS1	YMR240C	HNT3	Q08702	217 aa		4.2	□□□□□ -1.74
CUS1	YMR240C	TPT1	Q12272	230 aa	Known RBP	4.2	□□□□□ -1.74
CUS1	YMR240C	HEM15	P16622	393 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	SLY1	P22213	666 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	FAA1	P30624	700 aa	Known RBP	4.19	□□□□□ -1.74
CUS1	YMR240C	YSC83	P32792	385 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	RGT1	P32862	1170 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	KAP104	P38217	918 aa	Known RBP	4.19	□□□□□ -1.74
CUS1	YMR240C	SIF2	P38262	535 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	SFH5	P47008	294 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	AZR1	P50080	613 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	YIP5	P53108	310 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	DBP9	Q06218	594 aa	Known RBP	4.19	□□□□□ -1.74
CUS1	YMR240C	RNH203	Q12338	110 aa		4.19	□□□□□ -1.74
CUS1	YMR240C	UBA1	P22515	1024 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	AGA1	P32323	725 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	SKN1	P33336	771 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	FMP46	P36141	133 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	ATP3	P38077	311 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	TIF5	P38431	405 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	MNL1	P38888	796 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	MMF1	P40185	145 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	FYV8	P46949	817 aa	Known RBP	4.18	□□□□□ -1.74
CUS1	YMR240C	YGL260W	P53056	76 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	RTT102	P53330	157 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	GOR1	P53839	350 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	HXT11	P54862	567 aa		4.18	□□□□□ -1.74
CUS1	YMR240C	RPL12A	P0CX53	165 aa	Known RBP	4.17	□□□□□ -1.74
CUS1	YMR240C	RPL12B	P0CX54	165 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	VMA2	P16140	517 aa	Known RBP	4.17	□□□□□ -1.74
CUS1	YMR240C	YBR137W	P38276	179 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	SIM1	P40472	476 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	URC2	Q04411	772 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	BCH1	Q05029	724 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	SNX3	Q08826	162 aa	Known RBP	4.17	□□□□□ -1.74
CUS1	YMR240C	CEX1	Q12453	761 aa		4.17	□□□□□ -1.74
CUS1	YMR240C	SMI1	P32566	505 aa		4.16	□□□□□ -1.74
CUS1	YMR240C	YEL043W	P32618	956 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms