RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	MTG2	P38860	518 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	YHR177W	P38867	453 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	TPA1	P40032	644 aa	Known RBP	11.97	□□□□□ -0.49
LSM3	YLR438C-A	FAU1	P40099	211 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	STE24	P47154	453 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	YGR012W	P53206	393 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	RSF1	Q05043	376 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	ARR1	Q06596	294 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	PFK27	Q12471	397 aa	Predicted RBP	11.97	□□□□□ -0.49
LSM3	YLR438C-A	SKS1	Q12505	502 aa		11.97	□□□□□ -0.49
LSM3	YLR438C-A	HTS1	P07263	546 aa	Known RBP	11.96	□□□□□ -0.49
LSM3	YLR438C-A	MER1	P16523	270 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	DBP3	P20447	523 aa	Known RBP	11.96	□□□□□ -0.49
LSM3	YLR438C-A	ARP2	P32381	391 aa	Known RBP	11.96	□□□□□ -0.49
LSM3	YLR438C-A	ZTA1	P38230	334 aa	Known RBP	11.96	□□□□□ -0.49
LSM3	YLR438C-A	DLD3	P39976	496 aa	Known RBP	11.96	□□□□□ -0.49
LSM3	YLR438C-A	YJL068C	P40363	299 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	YIL086C	P40503	102 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	ELP2	P42935	788 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	ALR2	P43553	858 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	TIM54	P47045	478 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	ATF2	P53296	535 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	REC102	Q02721	264 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	NDL1	Q06568	189 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	FDH1	Q08911	376 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	GUP2	Q08929	609 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	PSY3	Q12318	242 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	YOR019W	Q99248	730 aa		11.96	□□□□□ -0.49
LSM3	YLR438C-A	AI4	P03878	556 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	ZWF1	P11412	505 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	YAK1	P14680	807 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	YAP1	P19880	650 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	SLY41	P22215	453 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	ARE1	P25628	610 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	MSN2	P33748	704 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	WBP1	P33767	430 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	TSL1	P38427	1098 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	RSP5	P39940	809 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	RPS12	P48589	143 aa	Known RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	ATP22	P50273	684 aa	Predicted RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	SKI8	Q02793	397 aa	Predicted RBP	11.95	□□□□□ -0.5
LSM3	YLR438C-A	YDL199C	Q12407	687 aa		11.95	□□□□□ -0.5
LSM3	YLR438C-A	ACC1	Q00955	2233 aa	Known RBP	11.94	□□□□□ -0.5
LSM3	YLR438C-A	RPB5	P20434	215 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	NTG1	P31378	399 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	ECM1	P39715	212 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	FMP52	P40008	231 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	UBC9	P50623	157 aa	Predicted RBP	11.94	□□□□□ -0.5
LSM3	YLR438C-A	CSL4	P53859	292 aa	Predicted RBP	11.94	□□□□□ -0.5
LSM3	YLR438C-A	ERG13	P54839	491 aa	Known RBP	11.94	□□□□□ -0.5
LSM3	YLR438C-A	TPP1	Q03796	238 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	KRE28	Q04431	385 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	SPO77	Q06134	477 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	RRT8	Q08219	342 aa		11.94	□□□□□ -0.5
LSM3	YLR438C-A	PUT2	P07275	575 aa		11.93	□□□□□ -0.5
LSM3	YLR438C-A	TEC1	P18412	486 aa		11.93	□□□□□ -0.5
LSM3	YLR438C-A	RPS1B	P23248	255 aa	Known RBP	11.93	□□□□□ -0.5
LSM3	YLR438C-A	AST1	P35183	429 aa		11.93	□□□□□ -0.5
LSM3	YLR438C-A	TEF4	P36008	412 aa	Known RBP	11.93	□□□□□ -0.5
LSM3	YLR438C-A	SPG5	P42933	373 aa		11.93	□□□□□ -0.5
LSM3	YLR438C-A	ASK10	P48361	1146 aa		11.93	□□□□□ -0.5
LSM3	YLR438C-A	WTM1	Q12363	437 aa	Known RBP	11.93	□□□□□ -0.5
LSM3	YLR438C-A	APN1	P22936	367 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	GRR1	P24814	1151 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	DMC1	P25453	334 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	MKK1	P32490	508 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	KAP122	P32767	1081 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	AUR1	P36107	401 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM3	YLR438C-A	SPC34	P36131	295 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	TED1	P40533	473 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	CDH1	P53197	566 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	YGR266W	P53326	701 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	YNL181W	P53878	407 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	ELP4	Q02884	456 aa	Known RBP	11.92	□□□□□ -0.5
LSM3	YLR438C-A	YMR310C	Q04867	317 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM3	YLR438C-A	DBP9	Q06218	594 aa	Known RBP	11.92	□□□□□ -0.5
LSM3	YLR438C-A	SFM1	Q12314	213 aa		11.92	□□□□□ -0.5
LSM3	YLR438C-A	MF(ALPHA)1	P01149	165 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	NUF2	P33895	451 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	VPS51	P36116	164 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	BET3	P36149	193 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	LEU5	P38702	357 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	YEL020C	P39994	560 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	QDR2	P40474	542 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	YGR201C	P42936	225 aa		11.91	□□□□□ -0.5
LSM3	YLR438C-A	HOS2	P53096	452 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM3	YLR438C-A	TIM9	O74700	87 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	GPH1	P06738	902 aa	Known RBP	11.9	□□□□□ -0.5
LSM3	YLR438C-A	STE6	P12866	1290 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	URA4	P20051	364 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	CLB4	P24871	460 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	LHP1	P33399	275 aa	Known RBP	11.9	□□□□□ -0.5
LSM3	YLR438C-A	SWH1	P35845	1188 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	RPS27A	P35997	82 aa	Known RBP	11.9	□□□□□ -0.5
LSM3	YLR438C-A	RIB1	P38066	345 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	RPS27B	P38711	82 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	BIG1	P38813	335 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	VMA10	P48836	114 aa	Known RBP	11.9	□□□□□ -0.5
LSM3	YLR438C-A	RMR1	P53060	241 aa		11.9	□□□□□ -0.5
LSM3	YLR438C-A	RRN5	Q02983	363 aa		11.9	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms