RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C PCL1P24867 279 aa1.75□□□□□ -2.13
IRC20YLR247C PRS1P32895 427 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C PET10P36139 283 aa1.75□□□□□ -2.13
IRC20YLR247C GND1P38720 489 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C ARO9P38840 513 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C HXT6P39003 570 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C DUG1P43616 481 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C PHO86P46956 311 aa1.75□□□□□ -2.13
IRC20YLR247C NIT2P47016 307 aa1.75□□□□□ -2.13
IRC20YLR247C YJR141WP47172 347 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C YGL114WP53134 725 aa1.75□□□□□ -2.13
IRC20YLR247C SGF73P53165 657 aa1.75□□□□□ -2.13
IRC20YLR247C YGR016WP53209 190 aa1.75□□□□□ -2.13
IRC20YLR247C YGR026WP53217 278 aa1.75□□□□□ -2.13
IRC20YLR247C RBG2P53295 368 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C NOP19P53317 196 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C COQ6P53318 479 aa1.75□□□□□ -2.13
IRC20YLR247C GOR1P53839 350 aa1.75□□□□□ -2.13
IRC20YLR247C SUR7P54003 302 aa1.75□□□□□ -2.13
IRC20YLR247C APM1Q00776 475 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C ADD37Q03233 198 aa1.75□□□□□ -2.13
IRC20YLR247C PLM2Q04383 521 aa1.75□□□□□ -2.13
IRC20YLR247C ARR3Q06598 404 aa1.75□□□□□ -2.13
IRC20YLR247C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
IRC20YLR247C PUS7Q08647 676 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C RDR1Q08904 546 aa1.75□□□□□ -2.13
IRC20YLR247C YOR223WQ12015 292 aa1.75□□□□□ -2.13
IRC20YLR247C YLR049CQ12110 428 aa1.75□□□□□ -2.13
IRC20YLR247C TMS1Q12116 473 aa1.75□□□□□ -2.13
IRC20YLR247C ATG31Q12421 196 aa1.75□□□□□ -2.13
IRC20YLR247C RGS2Q99188 309 aa1.75□□□□□ -2.13
IRC20YLR247C HFA1P32874 2273 aa1.75□□□□□ -2.13
IRC20YLR247C RPN13O13563 156 aa1.75□□□□□ -2.13
IRC20YLR247C URA3P03962 267 aa1.75□□□□□ -2.13
IRC20YLR247C CHS1P08004 1131 aa1.75□□□□□ -2.13
IRC20YLR247C RPS21AP0C0V8 87 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C RPS23AP0CX29 145 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C RPS23BP0CX30 145 aa1.75□□□□□ -2.13
IRC20YLR247C ZWF1P11412 505 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C FAR1P21268 830 aa1.75□□□□□ -2.13
IRC20YLR247C IDP1P21954 428 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C SED4P25365 1065 aa1.75□□□□□ -2.13
IRC20YLR247C DBF4P32325 704 aa1.75□□□□□ -2.13
IRC20YLR247C AAR2P32357 355 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C NUP2P32499 720 aa1.75□□□□□ -2.13
IRC20YLR247C MRS6P32864 603 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C SNU114P36048 1008 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C CCT6P39079 546 aa1.75□□□□□ -2.13
IRC20YLR247C DSS1P39112 969 aa1.75□□□□□ -2.13
IRC20YLR247C PAC2P39937 518 aa1.75□□□□□ -2.13
IRC20YLR247C RGI2P40188 164 aa1.75□□□□□ -2.13
IRC20YLR247C APQ12P40532 138 aa1.75□□□□□ -2.13
IRC20YLR247C MMM1P41800 426 aa1.75□□□□□ -2.13
IRC20YLR247C SNZ3P43545 298 aa1.75□□□□□ -2.13
IRC20YLR247C ATP22P50273 684 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C OGG1P53397 376 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C YNR066CP53752 436 aa1.75□□□□□ -2.13
IRC20YLR247C SNZ2P53824 298 aa1.75□□□□□ -2.13
IRC20YLR247C MRPL13Q02204 264 aa1.75□□□□□ -2.13
IRC20YLR247C YMR160WQ03823 816 aa1.75□□□□□ -2.13
IRC20YLR247C PKR1Q03880 122 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C SWA2Q06677 668 aa1.75□□□□□ -2.13
IRC20YLR247C SSK1Q07084 712 aa1.75□□□□□ -2.13
IRC20YLR247C YOL131WQ08270 108 aa1.75□□□□□ -2.13
IRC20YLR247C THP3Q12049 470 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C ELG1Q12050 791 aa1.75□□□□□ -2.13
IRC20YLR247C PER33Q12144 273 aa1.75□□□□□ -2.13
IRC20YLR247C TPO4Q12256 659 aa1.75□□□□□ -2.13
IRC20YLR247C YOL087CQ99247 1116 aa1.75□□□□□ -2.13
IRC20YLR247C CAP2P13517 287 aa1.75□□□□□ -2.13
IRC20YLR247C PET18P25362 215 aa1.75□□□□□ -2.13
IRC20YLR247C PTC6P25646 442 aa1.75□□□□□ -2.13
IRC20YLR247C DAL80P26343 269 aa1.75□□□□□ -2.13
IRC20YLR247C ITR2P30606 609 aa1.75□□□□□ -2.13
IRC20YLR247C ERG3P32353 365 aa1.75□□□□□ -2.13
IRC20YLR247C COQ2P32378 372 aa1.75□□□□□ -2.13
IRC20YLR247C RPF2P36160 344 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C ABZ1P37254 787 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C CBP4P37267 147 aa1.75□□□□□ -2.13
IRC20YLR247C APD1P38281 316 aa1.75□□□□□ -2.13
IRC20YLR247C FTH1P38310 465 aa1.75□□□□□ -2.13
IRC20YLR247C IMD2P38697 523 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C YHK8P38776 514 aa1.75□□□□□ -2.13
IRC20YLR247C YDR089WP38966 869 aa1.75□□□□□ -2.13
IRC20YLR247C YEA4P40004 342 aa1.75□□□□□ -2.13
IRC20YLR247C SCD6P45978 349 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13 RIP-Chip
IRC20YLR247C SIP4P46954 829 aa1.75□□□□□ -2.13
IRC20YLR247C IMD3P50095 523 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C DIP5P53388 608 aa1.75□□□□□ -2.13
IRC20YLR247C YMR166CQ03829 368 aa1.75□□□□□ -2.13
IRC20YLR247C RBS1Q05672 457 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C LOT6Q07923 191 aa1.75□□□□□ -2.13
IRC20YLR247C SDO1Q07953 250 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C YOL073CQ08232 322 aa1.75□□□□□ -2.13
IRC20YLR247C NDD1Q08887 554 aa1.75□□□□□ -2.13
IRC20YLR247C TGL5Q12043 749 aa1.75□□□□□ -2.13
IRC20YLR247C FAP7Q12055 197 aaPredicted RBP1.75□□□□□ -2.13
IRC20YLR247C ATG34Q12292 412 aa1.75□□□□□ -2.13
IRC20YLR247C HRT3Q12347 344 aa1.75□□□□□ -2.13
IRC20YLR247C CDC8P00572 216 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms