RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W TEF1P02994 458 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W HEM2P05373 342 aa1.33□□□□□ -2.2
SLX4YLR135W DAP2P18962 818 aa1.33□□□□□ -2.2
SLX4YLR135W SPS22P25380 463 aa1.33□□□□□ -2.2
SLX4YLR135W PHO91P27514 894 aa1.33□□□□□ -2.2
SLX4YLR135W FAA1P30624 700 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W CYS4P32582 507 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W RRP1P35178 278 aaPredicted RBP1.33□□□□□ -2.2
SLX4YLR135W MIX23P38162 196 aa1.33□□□□□ -2.2
SLX4YLR135W SIF2P38262 535 aa1.33□□□□□ -2.2
SLX4YLR135W WSS1P38838 269 aa1.33□□□□□ -2.2
SLX4YLR135W GPI16P38875 610 aa1.33□□□□□ -2.2
SLX4YLR135W FAA2P39518 744 aa1.33□□□□□ -2.2
SLX4YLR135W FYV8P46949 817 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W ASN2P49090 572 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W ATP22P50273 684 aaPredicted RBP1.33□□□□□ -2.2
SLX4YLR135W POP6P53218 158 aa1.33□□□□□ -2.2
SLX4YLR135W MSO1P53604 210 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W FRE4P53746 719 aa1.33□□□□□ -2.2
SLX4YLR135W MEH1Q02205 184 aa1.33□□□□□ -2.2
SLX4YLR135W MMT1Q03218 510 aa1.33□□□□□ -2.2
SLX4YLR135W YDR286CQ05530 114 aa1.33□□□□□ -2.2
SLX4YLR135W IPK1Q06667 281 aa1.33□□□□□ -2.2
SLX4YLR135W AAD15Q08361 143 aa1.33□□□□□ -2.2
SLX4YLR135W YPR022CQ12139 1133 aa1.33□□□□□ -2.2
SLX4YLR135W NFI1Q12216 726 aa1.33□□□□□ -2.2
SLX4YLR135W PKH2Q12236 1081 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W TPT1Q12272 230 aaKnown RBP1.33□□□□□ -2.2
SLX4YLR135W NBL1Q3E7Y6 73 aa1.33□□□□□ -2.2
SLX4YLR135W PDE2P06776 526 aa1.32□□□□□ -2.2
SLX4YLR135W CDC21P06785 304 aa1.32□□□□□ -2.2
SLX4YLR135W NFT1P0CE68 1218 aa1.32□□□□□ -2.2
SLX4YLR135W SPO12P17123 173 aa1.32□□□□□ -2.2
SLX4YLR135W ITR1P30605 584 aa1.32□□□□□ -2.2
SLX4YLR135W NRP1P32770 719 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SLX4YLR135W KKQ8P36004 724 aa1.32□□□□□ -2.2
SLX4YLR135W LAS1P36146 502 aaPredicted RBP1.32□□□□□ -2.2
SLX4YLR135W QDR3P38227 689 aa1.32□□□□□ -2.2
SLX4YLR135W PFF1P38244 976 aa1.32□□□□□ -2.2
SLX4YLR135W YBP1P38315 674 aa1.32□□□□□ -2.2
SLX4YLR135W NAS2P40555 220 aa1.32□□□□□ -2.2
SLX4YLR135W YJL213WP40896 331 aa1.32□□□□□ -2.2
SLX4YLR135W IDP2P41939 412 aa1.32□□□□□ -2.2
SLX4YLR135W EPL1P43572 832 aa1.32□□□□□ -2.2
SLX4YLR135W ROG1P53118 685 aa1.32□□□□□ -2.2
SLX4YLR135W BTN2P53286 410 aa1.32□□□□□ -2.2
SLX4YLR135W RTT102P53330 157 aa1.32□□□□□ -2.2
SLX4YLR135W PDR16P53860 351 aaKnown RBP1.32□□□□□ -2.2
SLX4YLR135W CRZ1P53968 678 aa1.32□□□□□ -2.2
SLX4YLR135W PIR3Q03180 325 aa1.32□□□□□ -2.2
SLX4YLR135W MGR3Q04472 501 aa1.32□□□□□ -2.2
SLX4YLR135W DBP9Q06218 594 aaKnown RBP1.32□□□□□ -2.2
SLX4YLR135W MUM3Q08750 479 aa1.32□□□□□ -2.2
SLX4YLR135W PPT2Q12036 173 aa1.32□□□□□ -2.2
SLX4YLR135W YBR298C-AQ8TGK4 73 aa1.32□□□□□ -2.2
SLX4YLR135W DST1P07273 309 aa1.32□□□□□ -2.2
SLX4YLR135W CHS1P08004 1131 aa1.32□□□□□ -2.2
SLX4YLR135W RPL12AP0CX53 165 aaKnown RBP1.32□□□□□ -2.2
SLX4YLR135W RPL12BP0CX54 165 aa1.32□□□□□ -2.2
SLX4YLR135W UBA1P22515 1024 aaKnown RBP1.32□□□□□ -2.2
SLX4YLR135W RDS1P25611 832 aa1.32□□□□□ -2.2
SLX4YLR135W ATS1P31386 333 aa1.32□□□□□ -2.2
SLX4YLR135W YSC83P32792 385 aa1.32□□□□□ -2.2
SLX4YLR135W STP2P38704 541 aa1.32□□□□□ -2.2
SLX4YLR135W YFR016CP43597 1233 aaKnown RBP1.32□□□□□ -2.2
SLX4YLR135W SFH5P47008 294 aa1.32□□□□□ -2.2
SLX4YLR135W EFM3P47163 339 aa1.32□□□□□ -2.2
SLX4YLR135W STD1Q02794 444 aa1.32□□□□□ -2.2
SLX4YLR135W BET5Q03630 159 aa1.32□□□□□ -2.2
SLX4YLR135W URC2Q04411 772 aa1.32□□□□□ -2.2
SLX4YLR135W YMR317WQ04893 1140 aa1.32□□□□□ -2.2
SLX4YLR135W RAX1Q08760 435 aa1.32□□□□□ -2.2
SLX4YLR135W YPL199CQ08954 240 aa1.32□□□□□ -2.2
SLX4YLR135W YDR061WQ12298 539 aa1.32□□□□□ -2.2
SLX4YLR135W RNH203Q12338 110 aa1.32□□□□□ -2.2
SLX4YLR135W SFG1Q12507 346 aa1.32□□□□□ -2.2
SLX4YLR135W HEM15P16622 393 aa1.31□□□□□ -2.2
SLX4YLR135W MCK1P21965 375 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W SKT5P34226 696 aa1.31□□□□□ -2.2
SLX4YLR135W YBR056WP38081 501 aa1.31□□□□□ -2.2
SLX4YLR135W TIF5P38431 405 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W YER079WP40052 210 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W SIM1P40472 476 aa1.31□□□□□ -2.2
SLX4YLR135W RPA34P47006 233 aaPredicted RBP1.31□□□□□ -2.2
SLX4YLR135W PIB2P53191 635 aa1.31□□□□□ -2.2
SLX4YLR135W YNR068CP53754 272 aa1.31□□□□□ -2.2
SLX4YLR135W RRB1Q04225 511 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W BCH1Q05029 724 aa1.31□□□□□ -2.2
SLX4YLR135W HNT3Q08702 217 aa1.31□□□□□ -2.2
SLX4YLR135W NDD1Q08887 554 aa1.31□□□□□ -2.2
SLX4YLR135W PSY3Q12318 242 aa1.31□□□□□ -2.2
SLX4YLR135W PAB1P04147 577 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SLX4YLR135W SAM1P10659 382 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W SAM2P19358 384 aaKnown RBP1.31□□□□□ -2.2
SLX4YLR135W PSO2P30620 661 aa1.31□□□□□ -2.2
SLX4YLR135W TOA1P32773 286 aa1.31□□□□□ -2.2
SLX4YLR135W TOA2P32774 122 aa1.31□□□□□ -2.2
SLX4YLR135W SKN1P33336 771 aa1.31□□□□□ -2.2
SLX4YLR135W SPT10P35208 640 aa1.31□□□□□ -2.2
SLX4YLR135W NAT2P37293 288 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms