RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeast

Gene RFU1, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFU1	YLR073C	SNZ3	P43545	298 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	GCD14	P46959	383 aa	Predicted RBP	4.37	□□□□□ -1.71
RFU1	YLR073C	TAH11	P47112	604 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	YJR054W	P47114	497 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	VOA1	P53262	265 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	SNZ2	P53824	298 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	BOP3	P53958	396 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	INA17	Q02888	182 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	TRS31	Q03337	283 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	YMR206W	Q03695	313 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	UFO1	Q04511	668 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	ERV41	Q04651	352 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	HRD3	Q05787	833 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	RSA3	Q05942	220 aa	Known RBP	4.37	□□□□□ -1.71
RFU1	YLR073C	GRS2	Q06817	618 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	STP4	Q07351	490 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	RCL1	Q08096	367 aa	Predicted RBP	4.37	□□□□□ -1.71
RFU1	YLR073C	NDD1	Q08887	554 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	LCB4	Q12246	624 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	NTO1	Q12311	748 aa		4.37	□□□□□ -1.71
RFU1	YLR073C	RNR2	P09938	399 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	SEC12	P11655	471 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SEN2	P16658	377 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SAR1	P20606	190 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	CMK2	P22517	447 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SAT4	P25333	603 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	RVS161	P25343	265 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	ARO4	P32449	370 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	ADE17	P38009	592 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	THI2	P38141	450 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	ECM13	P38195	257 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	MIP6	P38760	659 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	EGD2	P38879	174 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	MLH1	P38920	769 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	PRM9	P39551	298 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	FKH2	P41813	862 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	LOH1	P47055	219 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	ECM27	P47144	725 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	MIG2	P53035	382 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	TIM21	P53220	239 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	INN1	P53901	409 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	TIM8	P57744	87 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	BET4	Q00618	327 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SKO1	Q02100	647 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	YKR011C	Q02209	353 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	YDR179W-A	Q03983	463 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SPG3	Q04398	127 aa	Predicted RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	IVY1	Q04934	453 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SPC2	Q04969	178 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	PDR8	Q06149	701 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	NRT1	Q08485	598 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SAM4	Q08985	325 aa	Known RBP	4.36	□□□□□ -1.71
RFU1	YLR073C	YPL278C	Q08990	100 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	SPE4	Q12455	300 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	NAG1	Q8TGN9	163 aa		4.36	□□□□□ -1.71
RFU1	YLR073C	YBR085C-A	O43137	85 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	HIS4	P00815	799 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	PEP5	P12868	1029 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	URA4	P20051	364 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	KGD1	P20967	1014 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	VMA16	P23968	213 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YCL068C	P25593	260 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	ZIP1	P31111	875 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SEC66	P33754	206 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SWC5	P38326	303 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YHR078W	P38799	552 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	RTC3	P38804	111 aa	Predicted RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	FAD1	P38913	306 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
RFU1	YLR073C	ASG7	P46993	209 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	CIS3	P47001	227 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	MTR3	P48240	250 aa	Predicted RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	STR3	P53101	465 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	YGR012W	P53206	393 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SSU72	P53538	206 aa	Predicted RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	TRM112	P53738	135 aa	Predicted RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	SNO2	P53823	222 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SWS2	P53937	143 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	SLT2	Q00772	484 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	ACL4	Q03771	387 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	TRM82	Q03774	444 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	URH1	Q04179	340 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YMR130W	Q04223	302 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	APC4	Q04601	652 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YMR226C	Q05016	267 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	RBS1	Q05672	457 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	RRG8	Q06109	277 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YPR078C	Q06813	372 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	FRE3	Q08905	711 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	YPL216W	Q08964	1102 aa		4.35	□□□□□ -1.71
RFU1	YLR073C	FMP40	Q08968	688 aa	Predicted RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	HRP1	Q99383	534 aa	Known RBP	4.35	□□□□□ -1.71
RFU1	YLR073C	ARG81	P05085	880 aa		4.34	□□□□□ -1.71
RFU1	YLR073C	RPS3	P05750	240 aa	Known RBP	4.34	□□□□□ -1.71
RFU1	YLR073C	GAL3	P13045	520 aa		4.34	□□□□□ -1.71
RFU1	YLR073C	PDA1	P16387	420 aa	Known RBP	4.34	□□□□□ -1.71
RFU1	YLR073C	UTR1	P21373	530 aa		4.34	□□□□□ -1.71
RFU1	YLR073C	IDH2	P28241	369 aa	Known RBP	4.34	□□□□□ -1.71
RFU1	YLR073C	HXT3	P32466	567 aa	Known RBP	4.34	□□□□□ -1.71
RFU1	YLR073C	APT2	P36973	181 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms