RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C YLR456WQ06199 204 aa4.34□□□□□ -1.71
UBI4YLL039C RAD34Q06665 692 aa4.34□□□□□ -1.71
UBI4YLL039C YOL019WQ08157 551 aa4.34□□□□□ -1.71
UBI4YLL039C NOP12Q08208 459 aaKnown RBP4.34□□□□□ -1.71
UBI4YLL039C YDR056CQ12025 205 aa4.34□□□□□ -1.71
UBI4YLL039C RRP42Q12277 265 aaPredicted RBP4.34□□□□□ -1.71
UBI4YLL039C RGT2Q12300 763 aa4.34□□□□□ -1.71
UBI4YLL039C AHA1Q12449 350 aaKnown RBP4.34□□□□□ -1.71
UBI4YLL039C PET494P07390 489 aaPredicted RBP4.33□□□□□ -1.72
UBI4YLL039C ATR1P13090 542 aa4.33□□□□□ -1.72
UBI4YLL039C KIN2P13186 1147 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C SEN2P16658 377 aa4.33□□□□□ -1.72
UBI4YLL039C STF2P16965 84 aa4.33□□□□□ -1.72
UBI4YLL039C SEC15P22224 910 aa4.33□□□□□ -1.72
UBI4YLL039C MLS1P30952 554 aa4.33□□□□□ -1.72
UBI4YLL039C MEI5P32489 222 aa4.33□□□□□ -1.72
UBI4YLL039C VMA8P32610 256 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C CDC13P32797 924 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C RPS1AP33442 255 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C YKR078WP36158 585 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C IFA38P38286 347 aa4.33□□□□□ -1.72
UBI4YLL039C UTP9P38882 575 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C SEC31P38968 1273 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C LYS1P38998 373 aaRIP-Chip data4.33□□□□□ -1.72not detected
UBI4YLL039C NDE1P40215 560 aa4.33□□□□□ -1.72
UBI4YLL039C PHB1P40961 287 aa4.33□□□□□ -1.72
UBI4YLL039C VMA13P41807 478 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C GTF1P53260 183 aaPredicted RBP4.33□□□□□ -1.72
UBI4YLL039C GTR2P53290 341 aa4.33□□□□□ -1.72
UBI4YLL039C RBG2P53295 368 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C NRM1P53718 249 aa4.33□□□□□ -1.72
UBI4YLL039C YNL260CP53846 198 aa4.33□□□□□ -1.72
UBI4YLL039C TIM11P81449 96 aaPredicted RBP4.33□□□□□ -1.72
UBI4YLL039C YML131WQ03102 365 aa4.33□□□□□ -1.72
UBI4YLL039C DML1Q03652 475 aa4.33□□□□□ -1.72
UBI4YLL039C TVP15Q03860 143 aa4.33□□□□□ -1.72
UBI4YLL039C RAD30Q04049 632 aa4.33□□□□□ -1.72
UBI4YLL039C SSQ1Q05931 657 aaPredicted RBP4.33□□□□□ -1.72
UBI4YLL039C PSR1Q07800 427 aa4.33□□□□□ -1.72
UBI4YLL039C SNX3Q08826 162 aaKnown RBP4.33□□□□□ -1.72
UBI4YLL039C ATG29Q12092 213 aa4.33□□□□□ -1.72
UBI4YLL039C NOT5Q12514 560 aaPredicted RBP4.33□□□□□ -1.72
UBI4YLL039C SRN2Q99176 213 aa4.33□□□□□ -1.72
UBI4YLL039C LAT1P12695 482 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C YAK1P14680 807 aa4.32□□□□□ -1.72
UBI4YLL039C FUR1P18562 216 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C POL4P25615 582 aa4.32□□□□□ -1.72
UBI4YLL039C SYP1P25623 870 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C CWP1P28319 239 aa4.32□□□□□ -1.72
UBI4YLL039C HXT4P32467 576 aa4.32□□□□□ -1.72
UBI4YLL039C NRP1P32770 719 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
UBI4YLL039C RPT5P33297 434 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C SKN1P33336 771 aa4.32□□□□□ -1.72
UBI4YLL039C HES1P35843 434 aa4.32□□□□□ -1.72
UBI4YLL039C RMA1P36001 430 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C YPT53P36019 220 aa4.32□□□□□ -1.72
UBI4YLL039C TPO5P36029 618 aa4.32□□□□□ -1.72
UBI4YLL039C EMC3P36039 253 aa4.32□□□□□ -1.72
UBI4YLL039C CTP1P38152 299 aa4.32□□□□□ -1.72
UBI4YLL039C YLF2P38746 405 aa4.32□□□□□ -1.72
UBI4YLL039C CHS7P38843 316 aa4.32□□□□□ -1.72
UBI4YLL039C AXL2P38928 823 aa4.32□□□□□ -1.72
UBI4YLL039C GGC1P38988 300 aa4.32□□□□□ -1.72
UBI4YLL039C FRT2P39734 528 aa4.32□□□□□ -1.72
UBI4YLL039C LRO1P40345 661 aa4.32□□□□□ -1.72
UBI4YLL039C SNL1P40548 159 aa4.32□□□□□ -1.72
UBI4YLL039C GCD10P41814 478 aa4.32□□□□□ -1.72
UBI4YLL039C DUG1P43616 481 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C ALB1P47019 175 aaPredicted RBP4.32□□□□□ -1.72
UBI4YLL039C YJR154WP47181 346 aa4.32□□□□□ -1.72
UBI4YLL039C NOP19P53317 196 aaPredicted RBP4.32□□□□□ -1.72
UBI4YLL039C ARE2P53629 642 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C YAT1P80235 687 aa4.32□□□□□ -1.72
UBI4YLL039C FIN1Q03898 291 aa4.32□□□□□ -1.72
UBI4YLL039C STP3Q05937 343 aa4.32□□□□□ -1.72
UBI4YLL039C YDL121CQ07541 149 aa4.32□□□□□ -1.72
UBI4YLL039C DIN7Q12086 430 aa4.32□□□□□ -1.72
UBI4YLL039C YLR049CQ12110 428 aa4.32□□□□□ -1.72
UBI4YLL039C YLR125WQ12138 136 aa4.32□□□□□ -1.72
UBI4YLL039C YPR011CQ12251 326 aa4.32□□□□□ -1.72
UBI4YLL039C YDR262WQ12331 272 aa4.32□□□□□ -1.72
UBI4YLL039C APC2Q12440 853 aa4.32□□□□□ -1.72
UBI4YLL039C MHT1Q12525 324 aa4.32□□□□□ -1.72
UBI4YLL039C YLR111WQ12528 110 aa4.32□□□□□ -1.72
UBI4YLL039C RRP12Q12754 1228 aaKnown RBP4.32□□□□□ -1.72
UBI4YLL039C GAL4P04386 881 aa4.31□□□□□ -1.72
UBI4YLL039C RPL24AP04449 155 aaKnown RBP4.31□□□□□ -1.72
UBI4YLL039C GAL7P08431 366 aa4.31□□□□□ -1.72
UBI4YLL039C CDC34P14682 295 aa4.31□□□□□ -1.72
UBI4YLL039C MSS116P15424 664 aaKnown RBP4.31□□□□□ -1.72
UBI4YLL039C BUB2P26448 306 aaPredicted RBP4.31□□□□□ -1.72
UBI4YLL039C TFC1P32367 649 aa4.31□□□□□ -1.72
UBI4YLL039C COX13P32799 129 aa4.31□□□□□ -1.72
UBI4YLL039C SFC1P33303 322 aa4.31□□□□□ -1.72
UBI4YLL039C KKQ8P36004 724 aa4.31□□□□□ -1.72
UBI4YLL039C FMP46P36141 133 aaKnown RBP4.31□□□□□ -1.72
UBI4YLL039C BMT2P38278 337 aa4.31□□□□□ -1.72
UBI4YLL039C TSC10P38342 320 aa4.31□□□□□ -1.72
UBI4YLL039C STP2P38704 541 aa4.31□□□□□ -1.72
UBI4YLL039C BZZ1P38822 633 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms