RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YMR210WQ03649 449 aa9.55□□□□□ -0.88
SHB17YKR043C HSP31Q04432 237 aa9.55□□□□□ -0.88
SHB17YKR043C GGA1Q06336 557 aa9.55□□□□□ -0.88
SHB17YKR043C YLL007CQ07799 665 aa9.55□□□□□ -0.88
SHB17YKR043C YLR036CQ07986 203 aa9.55□□□□□ -0.88
SHB17YKR043C AKR2Q12013 749 aa9.55□□□□□ -0.88
SHB17YKR043C YKL033W-AQ86ZR7 236 aa9.55□□□□□ -0.88
SHB17YKR043C RNA1P11745 407 aaKnown RBP9.54□□□□□ -0.88
SHB17YKR043C TOP3P13099 656 aa9.54□□□□□ -0.88
SHB17YKR043C BUD14P27637 709 aa9.54□□□□□ -0.88
SHB17YKR043C NUP2P32499 720 aa9.54□□□□□ -0.88
SHB17YKR043C CUP9P41817 306 aa9.54□□□□□ -0.88
SHB17YKR043C MAL11P53048 616 aa9.54□□□□□ -0.88
SHB17YKR043C RAD33Q04231 177 aa9.54□□□□□ -0.88
SHB17YKR043C YMR310CQ04867 317 aaPredicted RBP9.54□□□□□ -0.88
SHB17YKR043C GTB1Q04924 702 aa9.54□□□□□ -0.88
SHB17YKR043C COS7Q07788 383 aa9.54□□□□□ -0.88
SHB17YKR043C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
SHB17YKR043C NUM1Q00402 2748 aa9.54□□□□□ -0.88
SHB17YKR043C RPB5P20434 215 aa9.53□□□□□ -0.88
SHB17YKR043C SAN1P22470 610 aa9.53□□□□□ -0.88
SHB17YKR043C SEF1P34228 1148 aa9.53□□□□□ -0.88
SHB17YKR043C TRR2P38816 342 aa9.53□□□□□ -0.88
SHB17YKR043C RIC1P40395 1056 aa9.53□□□□□ -0.88
SHB17YKR043C OCA1P50946 238 aaPredicted RBP9.53□□□□□ -0.88
SHB17YKR043C MIG2P53035 382 aa9.53□□□□□ -0.88
SHB17YKR043C YDR476CQ03362 224 aa9.53□□□□□ -0.88
SHB17YKR043C ENT2Q05785 613 aa9.53□□□□□ -0.88
SHB17YKR043C SSQ1Q05931 657 aaPredicted RBP9.53□□□□□ -0.88
SHB17YKR043C REH1Q06709 432 aa9.53□□□□□ -0.88
SHB17YKR043C SNX3Q08826 162 aaKnown RBP9.53□□□□□ -0.88
SHB17YKR043C TPO4Q12256 659 aa9.53□□□□□ -0.88
SHB17YKR043C SKS1Q12505 502 aa9.53□□□□□ -0.88
SHB17YKR043C NAR1P23503 491 aaKnown RBP9.52□□□□□ -0.89
SHB17YKR043C YCL049CP25577 312 aa9.52□□□□□ -0.89
SHB17YKR043C LAS21P40367 830 aa9.52□□□□□ -0.89
SHB17YKR043C PAC10P48363 199 aa9.52□□□□□ -0.89
SHB17YKR043C SPT20P50875 604 aa9.52□□□□□ -0.89
SHB17YKR043C NNF2P53253 936 aa9.52□□□□□ -0.89
SHB17YKR043C SPC24Q04477 213 aa9.52□□□□□ -0.89
SHB17YKR043C RAX1Q08760 435 aa9.52□□□□□ -0.89
SHB17YKR043C FDH1Q08911 376 aa9.52□□□□□ -0.89
SHB17YKR043C THP2O13539 261 aaKnown RBP9.51□□□□□ -0.89
SHB17YKR043C SEC62P21825 274 aa9.51□□□□□ -0.89
SHB17YKR043C CPR3P25719 182 aa9.51□□□□□ -0.89
SHB17YKR043C BET3P36149 193 aa9.51□□□□□ -0.89
SHB17YKR043C YHR177WP38867 453 aa9.51□□□□□ -0.89
SHB17YKR043C ALB1P47019 175 aaPredicted RBP9.51□□□□□ -0.89
SHB17YKR043C UBC9P50623 157 aaPredicted RBP9.51□□□□□ -0.89
SHB17YKR043C YGR067CP53243 804 aa9.51□□□□□ -0.89
SHB17YKR043C SUR7P54003 302 aa9.51□□□□□ -0.89
SHB17YKR043C YPR091CQ06833 770 aa9.51□□□□□ -0.89
SHB17YKR043C OSW1Q08692 278 aa9.51□□□□□ -0.89
SHB17YKR043C GPN2Q08726 347 aaPredicted RBP9.51□□□□□ -0.89
SHB17YKR043C YIG1Q08956 461 aa9.51□□□□□ -0.89
SHB17YKR043C REX3Q12090 404 aa9.51□□□□□ -0.89
SHB17YKR043C BSC1Q12140 328 aa9.51□□□□□ -0.89
SHB17YKR043C AAC3P18238 307 aa9.5□□□□□ -0.89
SHB17YKR043C MEF1P25039 761 aa9.5□□□□□ -0.89
SHB17YKR043C NAM9P27929 486 aa9.5□□□□□ -0.89
SHB17YKR043C YBR139WP38109 508 aa9.5□□□□□ -0.89
SHB17YKR043C FES1P38260 290 aa9.5□□□□□ -0.89
SHB17YKR043C RCK1P38622 512 aa9.5□□□□□ -0.89
SHB17YKR043C FAD1P38913 306 aa9.5□□□□□ -0.89
SHB17YKR043C DLD3P39976 496 aaKnown RBP9.5□□□□□ -0.89
SHB17YKR043C QDR2P40474 542 aa9.5□□□□□ -0.89
SHB17YKR043C MRPS18P42847 217 aa9.5□□□□□ -0.89
SHB17YKR043C KEL2P50090 882 aa9.5□□□□□ -0.89
SHB17YKR043C ATP22P50273 684 aaPredicted RBP9.5□□□□□ -0.89
SHB17YKR043C ROM1P53046 1155 aa9.5□□□□□ -0.89
SHB17YKR043C GTR1Q00582 310 aa9.5□□□□□ -0.89
SHB17YKR043C SMA2Q04658 369 aa9.5□□□□□ -0.89
SHB17YKR043C YPR172WQ06608 200 aa9.5□□□□□ -0.89
SHB17YKR043C PSR1Q07800 427 aa9.5□□□□□ -0.89
SHB17YKR043C MUM3Q08750 479 aa9.5□□□□□ -0.89
SHB17YKR043C FAS1P07149 2051 aaKnown RBP9.5□□□□□ -0.89
SHB17YKR043C YSF3P0C074 85 aaPredicted RBP9.49□□□□□ -0.89
SHB17YKR043C ATP7P30902 174 aa9.49□□□□□ -0.89
SHB17YKR043C SSE1P32589 693 aaKnown RBP9.49□□□□□ -0.89
SHB17YKR043C VPS51P36116 164 aa9.49□□□□□ -0.89
SHB17YKR043C MNN9P39107 395 aaKnown RBP9.49□□□□□ -0.89
SHB17YKR043C SER3P40054 469 aa9.49□□□□□ -0.89
SHB17YKR043C YJL068CP40363 299 aa9.49□□□□□ -0.89
SHB17YKR043C SNO3P43544 222 aa9.49□□□□□ -0.89
SHB17YKR043C YJR115WP47152 169 aa9.49□□□□□ -0.89
SHB17YKR043C YJR141WP47172 347 aaPredicted RBP9.49□□□□□ -0.89
SHB17YKR043C TPC1P53257 314 aa9.49□□□□□ -0.89
SHB17YKR043C NUP53Q03790 475 aa9.49□□□□□ -0.89
SHB17YKR043C YOR365CQ08844 703 aa9.49□□□□□ -0.89
SHB17YKR043C ATP2P00830 511 aaKnown RBP9.48□□□□□ -0.89
SHB17YKR043C HTS1P07263 546 aaKnown RBP9.48□□□□□ -0.89
SHB17YKR043C PWP1P21304 576 aaKnown RBP9.48□□□□□ -0.89
SHB17YKR043C MCK1P21965 375 aaKnown RBP9.48□□□□□ -0.89
SHB17YKR043C GPI12P23797 304 aa9.48□□□□□ -0.89
SHB17YKR043C MKK1P32490 508 aa9.48□□□□□ -0.89
SHB17YKR043C ATG14P38270 344 aa9.48□□□□□ -0.89
SHB17YKR043C IFA38P38286 347 aa9.48□□□□□ -0.89
SHB17YKR043C MTW1P39731 289 aa9.48□□□□□ -0.89
SHB17YKR043C PTI1P39927 425 aaPredicted RBP9.48□□□□□ -0.89
SHB17YKR043C PZF1P39933 429 aa9.48□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms