RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ICL1P28240 557 aaPredicted RBP1.4□□□□□ -2.19
VPS55YJR044C FAA1P30624 700 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C CRM1P30822 1084 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C SNC1P31109 117 aa1.4□□□□□ -2.19
VPS55YJR044C NDC1P32500 655 aa1.4□□□□□ -2.19
VPS55YJR044C NRP1P32770 719 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
VPS55YJR044C COX13P32799 129 aa1.4□□□□□ -2.19
VPS55YJR044C MTR2P34232 184 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C YUH1P35127 236 aa1.4□□□□□ -2.19
VPS55YJR044C ASC1P38011 319 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C TCM62P38228 572 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C SPT8P38915 602 aa1.4□□□□□ -2.19
VPS55YJR044C PAC11P40960 533 aa1.4□□□□□ -2.19
VPS55YJR044C ELP2P42935 788 aa1.4□□□□□ -2.19
VPS55YJR044C RPS10BP46784 105 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C AIM22P47051 409 aa1.4□□□□□ -2.19
VPS55YJR044C YGL242CP53066 181 aa1.4□□□□□ -2.19
VPS55YJR044C GPI1P53306 609 aa1.4□□□□□ -2.19
VPS55YJR044C MPP6P53725 186 aaPredicted RBP1.4□□□□□ -2.19
VPS55YJR044C ALF1P53904 254 aa1.4□□□□□ -2.19
VPS55YJR044C YPL014WQ02606 381 aa1.4□□□□□ -2.19
VPS55YJR044C YDR387CQ04162 555 aa1.4□□□□□ -2.19
VPS55YJR044C HSP31Q04432 237 aa1.4□□□□□ -2.19
VPS55YJR044C IVY1Q04934 453 aa1.4□□□□□ -2.19
VPS55YJR044C ERP1Q05359 219 aaKnown RBP1.4□□□□□ -2.19
VPS55YJR044C DIC1Q06143 298 aa1.4□□□□□ -2.19
VPS55YJR044C PHO92Q06390 306 aa1.4□□□□□ -2.19
VPS55YJR044C MRPL35Q06678 367 aa1.4□□□□□ -2.19
VPS55YJR044C TMC1Q08422 150 aaPredicted RBP1.4□□□□□ -2.19
VPS55YJR044C RPS10AQ08745 105 aaPredicted RBP1.4□□□□□ -2.19
VPS55YJR044C BUG1Q12191 341 aa1.4□□□□□ -2.19
VPS55YJR044C MRPL23Q12487 163 aaPredicted RBP1.4□□□□□ -2.19
VPS55YJR044C HIS4P00815 799 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C CBP2P03874 630 aaPredicted RBP1.39□□□□□ -2.19
VPS55YJR044C SCEIP03882 235 aa1.39□□□□□ -2.19
VPS55YJR044C CDC37P06101 506 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C RAD52P06778 471 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C PEP4P07267 405 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C RIP1P08067 215 aa1.39□□□□□ -2.19
VPS55YJR044C NFT1P0CE68 1218 aa1.39□□□□□ -2.19
VPS55YJR044C YAR066WP0CX18 203 aa1.39□□□□□ -2.19
VPS55YJR044C YHR214WP0CX19 203 aa1.39□□□□□ -2.19
VPS55YJR044C MAS1P10507 462 aa1.39□□□□□ -2.19
VPS55YJR044C DAP2P18962 818 aa1.39□□□□□ -2.19
VPS55YJR044C SIN4P32259 974 aa1.39□□□□□ -2.19
VPS55YJR044C HMX1P32339 317 aa1.39□□□□□ -2.19
VPS55YJR044C SPC110P32380 944 aa1.39□□□□□ -2.19
VPS55YJR044C MNS1P32906 549 aa1.39□□□□□ -2.19
VPS55YJR044C SIP2P34164 415 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C SPT10P35208 640 aa1.39□□□□□ -2.19
VPS55YJR044C SOR1P35497 357 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C PTK1P36002 662 aaPredicted RBP1.39□□□□□ -2.19
VPS55YJR044C KKQ8P36004 724 aa1.39□□□□□ -2.19
VPS55YJR044C DOA1P36037 715 aa1.39□□□□□ -2.19
VPS55YJR044C MRPL37P36532 105 aa1.39□□□□□ -2.19
VPS55YJR044C ATP3P38077 311 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C PCH2P38126 564 aa1.39□□□□□ -2.19
VPS55YJR044C DUG2P38149 878 aa1.39□□□□□ -2.19
VPS55YJR044C RFS1P38234 210 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C SPP381P38282 291 aaPredicted RBP1.39□□□□□ -2.19
VPS55YJR044C INM1P38710 295 aa1.39□□□□□ -2.19
VPS55YJR044C RRP4P38792 359 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C YHR131CP38835 850 aa1.39□□□□□ -2.19
VPS55YJR044C PEX18P38855 283 aa1.39□□□□□ -2.19
VPS55YJR044C YHR210CP38893 341 aa1.39□□□□□ -2.19
VPS55YJR044C MLH1P38920 769 aa1.39□□□□□ -2.19
VPS55YJR044C SMC2P38989 1170 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C SSO2P39926 295 aa1.39□□□□□ -2.19
VPS55YJR044C MMF1P40185 145 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C YMR147WP40218 223 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C TFG2P41896 400 aaPredicted RBP1.39□□□□□ -2.19
VPS55YJR044C ECM27P47144 725 aa1.39□□□□□ -2.19
VPS55YJR044C HMS2P47175 358 aa1.39□□□□□ -2.19
VPS55YJR044C PCP1P53259 346 aa1.39□□□□□ -2.19
VPS55YJR044C BUD32P53323 261 aa1.39□□□□□ -2.19
VPS55YJR044C MRP51Q02950 344 aa1.39□□□□□ -2.19
VPS55YJR044C RRN5Q02983 363 aa1.39□□□□□ -2.19
VPS55YJR044C MSC1Q03104 513 aa1.39□□□□□ -2.19
VPS55YJR044C ABZ2Q03266 374 aa1.39□□□□□ -2.19
VPS55YJR044C YPR078CQ06813 372 aa1.39□□□□□ -2.19
VPS55YJR044C SOR2Q07786 357 aa1.39□□□□□ -2.19
VPS55YJR044C YEH2Q07950 538 aa1.39□□□□□ -2.19
VPS55YJR044C MUM3Q08750 479 aa1.39□□□□□ -2.19
VPS55YJR044C SGT2Q12118 346 aaKnown RBP1.39□□□□□ -2.19
VPS55YJR044C AYT1Q12226 474 aa1.39□□□□□ -2.19
VPS55YJR044C RUP1Q12242 671 aa1.39□□□□□ -2.19
VPS55YJR044C RRD2Q12461 358 aa1.39□□□□□ -2.19
VPS55YJR044C RGS2Q99188 309 aa1.39□□□□□ -2.19
VPS55YJR044C VPS63O13549 108 aa1.38□□□□□ -2.19
VPS55YJR044C ADE4P04046 510 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C RNR2P09938 399 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C THR4P16120 514 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C SAR1P20606 190 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C SEC62P21825 274 aa1.38□□□□□ -2.19
VPS55YJR044C ELO2P25358 347 aa1.38□□□□□ -2.19
VPS55YJR044C PET18P25362 215 aa1.38□□□□□ -2.19
VPS55YJR044C RDS1P25611 832 aa1.38□□□□□ -2.19
VPS55YJR044C PRP21P32524 280 aaPredicted RBP1.38□□□□□ -2.19
VPS55YJR044C YSC83P32792 385 aa1.38□□□□□ -2.19
VPS55YJR044C PPQ1P32945 549 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms