RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W CAF130P53280 1122 aaPredicted RBP3.16□□□□□ -1.9
NDC80YIL144W SOL4P53315 255 aa3.16□□□□□ -1.9
NDC80YIL144W HEF3P53978 1044 aaKnown RBP3.16□□□□□ -1.9
NDC80YIL144W YPL014WQ02606 381 aa3.16□□□□□ -1.9
NDC80YIL144W PET117Q02771 107 aa3.16□□□□□ -1.9
NDC80YIL144W BSC1Q12140 328 aa3.16□□□□□ -1.9
NDC80YIL144W MED4Q12343 284 aa3.16□□□□□ -1.9
NDC80YIL144W YFL068WP0CX99 160 aa3.15□□□□□ -1.9
NDC80YIL144W YLL066W-AP0CY00 160 aa3.15□□□□□ -1.9
NDC80YIL144W YLL067W-AP0CY01 160 aa3.15□□□□□ -1.9
NDC80YIL144W SAM1P10659 382 aaKnown RBP3.15□□□□□ -1.9
NDC80YIL144W YIM1P28625 365 aa3.15□□□□□ -1.9
NDC80YIL144W MEI5P32489 222 aa3.15□□□□□ -1.9
NDC80YIL144W BMH2P34730 273 aaKnown RBP3.15□□□□□ -1.9
NDC80YIL144W PTK1P36002 662 aaPredicted RBP3.15□□□□□ -1.9
NDC80YIL144W KDX1P36005 433 aa3.15□□□□□ -1.9
NDC80YIL144W ROT2P38138 954 aa3.15□□□□□ -1.9
NDC80YIL144W PET100P38958 111 aa3.15□□□□□ -1.9
NDC80YIL144W VHS2P40463 436 aa3.15□□□□□ -1.9
NDC80YIL144W RIB4P50861 169 aaPredicted RBP3.15□□□□□ -1.9
NDC80YIL144W YIP5P53108 310 aa3.15□□□□□ -1.9
NDC80YIL144W YGR126WP53274 230 aa3.15□□□□□ -1.9
NDC80YIL144W DBP6P53734 629 aaKnown RBP3.15□□□□□ -1.9
NDC80YIL144W YVH1Q02256 364 aaKnown RBP3.15□□□□□ -1.9
NDC80YIL144W SRL4Q03085 281 aa3.15□□□□□ -1.9
NDC80YIL144W YMR130WQ04223 302 aa3.15□□□□□ -1.9
NDC80YIL144W RRP45Q05636 305 aaKnown RBP3.15□□□□□ -1.9
NDC80YIL144W DIC1Q06143 298 aa3.15□□□□□ -1.9
NDC80YIL144W NDL1Q06568 189 aa3.15□□□□□ -1.9
NDC80YIL144W VAC14Q06708 880 aa3.15□□□□□ -1.9
NDC80YIL144W SUC2P00724 532 aa3.15□□□□□ -1.91
NDC80YIL144W COR1P07256 457 aa3.15□□□□□ -1.91
NDC80YIL144W RPL31BP0C2H9 113 aaKnown RBP3.15□□□□□ -1.91
NDC80YIL144W RPB8P20436 146 aa3.15□□□□□ -1.91
NDC80YIL144W PDR3P33200 976 aa3.15□□□□□ -1.91
NDC80YIL144W ASC1P38011 319 aaKnown RBP3.15□□□□□ -1.91
NDC80YIL144W SWC5P38326 303 aa3.15□□□□□ -1.91
NDC80YIL144W YHR045WP38775 560 aa3.15□□□□□ -1.91
NDC80YIL144W OTU1P43558 301 aa3.15□□□□□ -1.91
NDC80YIL144W SNG1P46950 547 aa3.15□□□□□ -1.91
NDC80YIL144W ATG27P46989 271 aa3.15□□□□□ -1.91
NDC80YIL144W URB2P47108 1174 aa3.15□□□□□ -1.91
NDC80YIL144W BRO1P48582 844 aa3.15□□□□□ -1.91
NDC80YIL144W HSH155P49955 971 aaKnown RBP3.15□□□□□ -1.91
NDC80YIL144W SMM1P53720 384 aaKnown RBP3.15□□□□□ -1.91
NDC80YIL144W CTL1Q03220 320 aaKnown RBP3.15□□□□□ -1.91
NDC80YIL144W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
NDC80YIL144W YOR012WQ12351 137 aa3.15□□□□□ -1.91
NDC80YIL144W LEU4P06208 619 aaKnown RBP3.14□□□□□ -1.91
NDC80YIL144W GID7P25569 745 aa3.14□□□□□ -1.91
NDC80YIL144W RRP1P35178 278 aaPredicted RBP3.14□□□□□ -1.91
NDC80YIL144W YJR154WP47181 346 aa3.14□□□□□ -1.91
NDC80YIL144W YGR117CP53270 476 aa3.14□□□□□ -1.91
NDC80YIL144W RTC4P53850 401 aa3.14□□□□□ -1.91
NDC80YIL144W RHO4Q00246 291 aa3.14□□□□□ -1.91
NDC80YIL144W GTO3Q04806 366 aa3.14□□□□□ -1.91
NDC80YIL144W RDR1Q08904 546 aa3.14□□□□□ -1.91
NDC80YIL144W CFT1Q06632 1357 aaKnown RBP3.14□□□□□ -1.91
NDC80YIL144W CAR1P00812 333 aaKnown RBP3.13□□□□□ -1.91
NDC80YIL144W PEP5P12868 1029 aa3.13□□□□□ -1.91
NDC80YIL144W PPZ1P26570 692 aa3.13□□□□□ -1.91
NDC80YIL144W MSN2P33748 704 aa3.13□□□□□ -1.91
NDC80YIL144W SPC34P36131 295 aa3.13□□□□□ -1.91
NDC80YIL144W EFM2P38347 419 aa3.13□□□□□ -1.91
NDC80YIL144W END3P39013 349 aa3.13□□□□□ -1.91
NDC80YIL144W VRG4P40107 337 aa3.13□□□□□ -1.91
NDC80YIL144W DUG3P53871 357 aa3.13□□□□□ -1.91
NDC80YIL144W STD1Q02794 444 aa3.13□□□□□ -1.91
NDC80YIL144W CAB5Q03941 241 aa3.13□□□□□ -1.91
NDC80YIL144W RRG8Q06109 277 aa3.13□□□□□ -1.91
NDC80YIL144W SMC5Q08204 1093 aa3.13□□□□□ -1.91
NDC80YIL144W THP1Q08231 455 aa3.13□□□□□ -1.91
NDC80YIL144W GEP3Q08622 556 aa3.13□□□□□ -1.91
NDC80YIL144W RVS161P25343 265 aaKnown RBP3.13□□□□□ -1.91
NDC80YIL144W MGR1P25573 417 aa3.13□□□□□ -1.91
NDC80YIL144W BEM1P29366 551 aa3.13□□□□□ -1.91
NDC80YIL144W HXT1P32465 570 aa3.13□□□□□ -1.91
NDC80YIL144W RTS2P40962 232 aa3.13□□□□□ -1.91
NDC80YIL144W YGL114WP53134 725 aa3.13□□□□□ -1.91
NDC80YIL144W YGL108CP53139 140 aa3.13□□□□□ -1.91
NDC80YIL144W OCA2P53949 197 aa3.13□□□□□ -1.91
NDC80YIL144W STP1Q00947 519 aa3.13□□□□□ -1.91
NDC80YIL144W YMR087WQ04299 284 aa3.13□□□□□ -1.91
NDC80YIL144W DCS1Q06151 350 aa3.13□□□□□ -1.91
NDC80YIL144W LOT6Q07923 191 aa3.13□□□□□ -1.91
NDC80YIL144W RKM1Q08961 583 aaPredicted RBP3.13□□□□□ -1.91
NDC80YIL144W MED2Q12124 431 aa3.13□□□□□ -1.91
NDC80YIL144W MTR10Q99189 972 aa3.13□□□□□ -1.91
NDC80YIL144W RNR2P09938 399 aaKnown RBP3.12□□□□□ -1.91
NDC80YIL144W BAR1P12630 587 aa3.12□□□□□ -1.91
NDC80YIL144W OSM1P21375 501 aaKnown RBP3.12□□□□□ -1.91
NDC80YIL144W APA2P22108 325 aa3.12□□□□□ -1.91
NDC80YIL144W YCR016WP25617 290 aaKnown RBP3.12□□□□□ -1.91
NDC80YIL144W HIR2P32480 875 aa3.12□□□□□ -1.91
NDC80YIL144W SHP1P34223 423 aa3.12□□□□□ -1.91
NDC80YIL144W YPK3P38070 525 aa3.12□□□□□ -1.91
NDC80YIL144W DUG2P38149 878 aa3.12□□□□□ -1.91
NDC80YIL144W ERG7P38604 731 aa3.12□□□□□ -1.91
NDC80YIL144W LAG1P38703 411 aa3.12□□□□□ -1.91
NDC80YIL144W YHR182WP38870 785 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms