RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W YGR149WP48236 432 aa1.9□□□□□ -2.11
RTT102YGR275W FRE4P53746 719 aa1.9□□□□□ -2.11
RTT102YGR275W RPT6Q01939 405 aaKnown RBP1.9□□□□□ -2.11
RTT102YGR275W IOC4Q04213 475 aa1.9□□□□□ -2.11
RTT102YGR275W HSP31Q04432 237 aa1.9□□□□□ -2.11
RTT102YGR275W SLM3Q12093 417 aa1.9□□□□□ -2.11
RTT102YGR275W RRD2Q12461 358 aa1.9□□□□□ -2.11
RTT102YGR275W NUM1Q00402 2748 aa1.9□□□□□ -2.11
RTT102YGR275W FIG2P25653 1609 aa1.9□□□□□ -2.11
RTT102YGR275W ADE6P38972 1358 aaKnown RBP1.89□□□□□ -2.11
RTT102YGR275W YML133CQ03099 1374 aa1.89□□□□□ -2.11
RTT102YGR275W YLL067CQ07888 1374 aa1.89□□□□□ -2.11
RTT102YGR275W YLL066CQ99208 1374 aa1.89□□□□□ -2.11
RTT102YGR275W NFT1P0CE68 1218 aa1.89□□□□□ -2.11
RTT102YGR275W APE2P32454 952 aaKnown RBP1.89□□□□□ -2.11
RTT102YGR275W PRP21P32524 280 aaPredicted RBP1.89□□□□□ -2.11
RTT102YGR275W ECM25P32525 599 aa1.89□□□□□ -2.11
RTT102YGR275W PMT1P33775 817 aa1.89□□□□□ -2.11
RTT102YGR275W YEL057CP39983 233 aa1.89□□□□□ -2.11
RTT102YGR275W TFG2P41896 400 aaPredicted RBP1.89□□□□□ -2.11
RTT102YGR275W YIF1P53845 314 aaKnown RBP1.89□□□□□ -2.11
RTT102YGR275W GIR2Q03768 265 aaPredicted RBP1.89□□□□□ -2.11
RTT102YGR275W TAP42Q04372 366 aa1.89□□□□□ -2.11
RTT102YGR275W MRD1Q06106 887 aaKnown RBP1.89□□□□□ -2.11
RTT102YGR275W IRC25Q07951 179 aa1.89□□□□□ -2.11
RTT102YGR275W SNX3Q08826 162 aaKnown RBP1.89□□□□□ -2.11
RTT102YGR275W FDH1Q08911 376 aa1.89□□□□□ -2.11
RTT102YGR275W ATG29Q12092 213 aa1.89□□□□□ -2.11
RTT102YGR275W HIS4P00815 799 aaKnown RBP1.88□□□□□ -2.11
RTT102YGR275W TRP1P00912 224 aa1.88□□□□□ -2.11
RTT102YGR275W TEF1P02994 458 aaKnown RBP1.88□□□□□ -2.11
RTT102YGR275W ARG4P04076 463 aaPredicted RBP1.88□□□□□ -2.11
RTT102YGR275W MUD1P32605 298 aaKnown RBP1.88□□□□□ -2.11
RTT102YGR275W SEC66P33754 206 aa1.88□□□□□ -2.11
RTT102YGR275W VID24P38263 362 aa1.88□□□□□ -2.11
RTT102YGR275W LYS1P38998 373 aaRIP-Chip data1.88□□□□□ -2.11not detected
RTT102YGR275W HXT14P42833 540 aa1.88□□□□□ -2.11
RTT102YGR275W YNR048WP53740 393 aa1.88□□□□□ -2.11
RTT102YGR275W YLR419WQ06698 1435 aaKnown RBP1.88□□□□□ -2.11
RTT102YGR275W SPS4P09937 338 aa1.87□□□□□ -2.11
RTT102YGR275W HSP26P15992 214 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
RTT102YGR275W RPI1P23250 407 aaKnown RBP1.87□□□□□ -2.11
RTT102YGR275W SNT1P25357 1226 aa1.87□□□□□ -2.11
RTT102YGR275W POP5P28005 173 aa1.87□□□□□ -2.11
RTT102YGR275W ITR1P30605 584 aa1.87□□□□□ -2.11
RTT102YGR275W NIP100P33420 868 aa1.87□□□□□ -2.11
RTT102YGR275W KKQ8P36004 724 aa1.87□□□□□ -2.11
RTT102YGR275W CCT2P39076 527 aaKnown RBP1.87□□□□□ -2.11
RTT102YGR275W ESL1P40456 1118 aa1.87□□□□□ -2.11
RTT102YGR275W SPO22P40511 975 aa1.87□□□□□ -2.11
RTT102YGR275W BRO1P48582 844 aa1.87□□□□□ -2.11
RTT102YGR275W ARE2P53629 642 aaKnown RBP1.87□□□□□ -2.11
RTT102YGR275W RIM20Q12033 661 aa1.87□□□□□ -2.11
RTT102YGR275W VPS13Q07878 3144 aa1.86□□□□□ -2.11
RTT102YGR275W ICL1P28240 557 aaPredicted RBP1.86□□□□□ -2.11
RTT102YGR275W SMY1P32364 656 aaKnown RBP1.86□□□□□ -2.11
RTT102YGR275W NUP2P32499 720 aa1.86□□□□□ -2.11
RTT102YGR275W YBR137WP38276 179 aa1.86□□□□□ -2.11
RTT102YGR275W VHC1P38329 1120 aa1.86□□□□□ -2.11
RTT102YGR275W YHR054CP38780 354 aa1.86□□□□□ -2.11
RTT102YGR275W SHC1P39000 512 aa1.86□□□□□ -2.11
RTT102YGR275W VTC2P43585 828 aa1.86□□□□□ -2.11
RTT102YGR275W REX4Q08237 289 aa1.86□□□□□ -2.11
RTT102YGR275W SGT1Q08446 395 aa1.86□□□□□ -2.11
RTT102YGR275W TOR1P35169 2470 aa1.86□□□□□ -2.11
RTT102YGR275W GSC2P40989 1895 aa1.86□□□□□ -2.11
RTT102YGR275W GPH1P06738 902 aaKnown RBP1.85□□□□□ -2.11
RTT102YGR275W NPL6P32832 435 aa1.85□□□□□ -2.11
RTT102YGR275W YKL097CP34245 136 aa1.85□□□□□ -2.11
RTT102YGR275W PFF1P38244 976 aa1.85□□□□□ -2.11
RTT102YGR275W YHR131CP38835 850 aa1.85□□□□□ -2.11
RTT102YGR275W ARF3P40994 183 aaRIP-Chip data1.85□□□□□ -2.11not detected
RTT102YGR275W GAB1P41733 394 aa1.85□□□□□ -2.11
RTT102YGR275W HMS2P47175 358 aa1.85□□□□□ -2.11
RTT102YGR275W BET5Q03630 159 aa1.85□□□□□ -2.11
RTT102YGR275W RQC1Q05468 723 aaKnown RBP1.85□□□□□ -2.11
RTT102YGR275W CUE5Q08412 411 aaKnown RBP1.85□□□□□ -2.11
RTT102YGR275W ORT1Q12375 292 aa1.85□□□□□ -2.11
RTT102YGR275W PMD1P32634 1753 aa1.85□□□□□ -2.11
RTT102YGR275W RPO41P13433 1351 aaKnown RBP1.85□□□□□ -2.11
RTT102YGR275W CYC3P06182 269 aa1.84□□□□□ -2.11
RTT102YGR275W MET8P15807 274 aa1.84□□□□□ -2.11
RTT102YGR275W GPI10P30777 616 aa1.84□□□□□ -2.11
RTT102YGR275W KAR9P32526 644 aa1.84□□□□□ -2.11
RTT102YGR275W CSE2P33308 149 aa1.84□□□□□ -2.11
RTT102YGR275W UTP18P40362 594 aaPredicted RBP1.84□□□□□ -2.11
RTT102YGR275W MET18P40469 1032 aa1.84□□□□□ -2.11
RTT102YGR275W SAS2P40963 338 aa1.84□□□□□ -2.11
RTT102YGR275W VMA13P41807 478 aaKnown RBP1.84□□□□□ -2.11
RTT102YGR275W SSU1P41930 458 aa1.84□□□□□ -2.11
RTT102YGR275W KTR5P53966 522 aaPredicted RBP1.84□□□□□ -2.11
RTT102YGR275W ADA2Q02336 434 aa1.84□□□□□ -2.11
RTT102YGR275W YRM1Q12340 786 aa1.84□□□□□ -2.11
RTT102YGR275W BI3Q9ZZW7 517 aa1.84□□□□□ -2.11
RTT102YGR275W UTP10P42945 1769 aaKnown RBP1.84□□□□□ -2.12
RTT102YGR275W SIR4P11978 1358 aa1.84□□□□□ -2.12
RTT102YGR275W ARG3P05150 338 aa1.83□□□□□ -2.12
RTT102YGR275W RIP1P08067 215 aa1.83□□□□□ -2.12
RTT102YGR275W CUP1-1P0CX80 61 aa1.83□□□□□ -2.12
RTT102YGR275W CUP1-2P0CX81 61 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms