RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YOL075CQ08234 1294 aa2.18□□□□□ -2.06
CBF2YGR140W LSP1Q12230 341 aaKnown RBP2.18□□□□□ -2.06
CBF2YGR140W SUT2Q12286 268 aa2.18□□□□□ -2.06
CBF2YGR140W EDE1P34216 1381 aa2.18□□□□□ -2.06
CBF2YGR140W CFT1Q06632 1357 aaKnown RBP2.18□□□□□ -2.06
CBF2YGR140W CLN3P13365 580 aa2.18□□□□□ -2.06
CBF2YGR140W CDC23P16522 626 aa2.18□□□□□ -2.06
CBF2YGR140W PMA2P19657 947 aa2.18□□□□□ -2.06
CBF2YGR140W EXO70P19658 623 aa2.18□□□□□ -2.06
CBF2YGR140W PRP21P32524 280 aaPredicted RBP2.18□□□□□ -2.06
CBF2YGR140W ECT1P33412 323 aa2.18□□□□□ -2.06
CBF2YGR140W OCT1P35999 772 aa2.18□□□□□ -2.06
CBF2YGR140W APD1P38281 316 aa2.18□□□□□ -2.06
CBF2YGR140W YHR045WP38775 560 aa2.18□□□□□ -2.06
CBF2YGR140W BUD32P53323 261 aa2.18□□□□□ -2.06
CBF2YGR140W YNL234WP53857 426 aa2.18□□□□□ -2.06
CBF2YGR140W YNL134CP53912 376 aaKnown RBP2.18□□□□□ -2.06
CBF2YGR140W SMP3Q04174 516 aa2.18□□□□□ -2.06
CBF2YGR140W STE23Q06010 1027 aa2.18□□□□□ -2.06
CBF2YGR140W BOP2Q06150 570 aa2.18□□□□□ -2.06
CBF2YGR140W FSH3Q99369 266 aa2.18□□□□□ -2.06
CBF2YGR140W COX3P00420 269 aa2.17□□□□□ -2.06
CBF2YGR140W RAD52P06778 471 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W CHS1P08004 1131 aa2.17□□□□□ -2.06
CBF2YGR140W BAR1P12630 587 aa2.17□□□□□ -2.06
CBF2YGR140W VPS1P21576 704 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W SEC62P21825 274 aa2.17□□□□□ -2.06
CBF2YGR140W RAD51P25454 400 aa2.17□□□□□ -2.06
CBF2YGR140W YCL068CP25593 260 aa2.17□□□□□ -2.06
CBF2YGR140W YCR016WP25617 290 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W SMY1P32364 656 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W ATP11P32453 318 aa2.17□□□□□ -2.06
CBF2YGR140W RAD23P32628 398 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W TRM2P33753 639 aa2.17□□□□□ -2.06
CBF2YGR140W YBR139WP38109 508 aa2.17□□□□□ -2.06
CBF2YGR140W RIM2P38127 377 aa2.17□□□□□ -2.06
CBF2YGR140W UBA4P38820 440 aa2.17□□□□□ -2.06
CBF2YGR140W MRX5P47007 382 aa2.17□□□□□ -2.06
CBF2YGR140W PYK2P52489 506 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W PCP1P53259 346 aa2.17□□□□□ -2.06
CBF2YGR140W YGR168CP53293 376 aa2.17□□□□□ -2.06
CBF2YGR140W SOL4P53315 255 aa2.17□□□□□ -2.06
CBF2YGR140W YPL014WQ02606 381 aa2.17□□□□□ -2.06
CBF2YGR140W MDM30Q05930 598 aa2.17□□□□□ -2.06
CBF2YGR140W DNL4Q08387 944 aaPredicted RBP2.17□□□□□ -2.06
CBF2YGR140W YOR365CQ08844 703 aa2.17□□□□□ -2.06
CBF2YGR140W PLP2Q12017 286 aa2.17□□□□□ -2.06
CBF2YGR140W SLF1Q12034 447 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W RMD5Q12508 421 aa2.17□□□□□ -2.06
CBF2YGR140W TPK3P05986 398 aa2.17□□□□□ -2.06
CBF2YGR140W ARF1P11076 181 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W PET123P17558 318 aa2.17□□□□□ -2.06
CBF2YGR140W CNA1P23287 553 aa2.17□□□□□ -2.06
CBF2YGR140W GSY2P27472 705 aa2.17□□□□□ -2.06
CBF2YGR140W EFB1P32471 206 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W RAD24P32641 659 aa2.17□□□□□ -2.06
CBF2YGR140W BUD2P33314 1104 aa2.17□□□□□ -2.06
CBF2YGR140W SKN1P33336 771 aa2.17□□□□□ -2.06
CBF2YGR140W RRP3P38712 501 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W RTT107P38850 1070 aa2.17□□□□□ -2.06
CBF2YGR140W TDA11P38854 504 aa2.17□□□□□ -2.06
CBF2YGR140W SEC9P40357 651 aa2.17□□□□□ -2.06
CBF2YGR140W FMC1P40491 155 aa2.17□□□□□ -2.06
CBF2YGR140W LYS12P40495 371 aaKnown RBP2.17□□□□□ -2.06
CBF2YGR140W SYG1P40528 902 aa2.17□□□□□ -2.06
CBF2YGR140W LOC1P43586 204 aaPredicted RBP2.17□□□□□ -2.06
CBF2YGR140W TRS85P46944 698 aa2.17□□□□□ -2.06
CBF2YGR140W STD1Q02794 444 aa2.17□□□□□ -2.06
CBF2YGR140W TMN2Q04562 672 aa2.17□□□□□ -2.06
CBF2YGR140W GTO3Q04806 366 aa2.17□□□□□ -2.06
CBF2YGR140W COQ11Q05892 277 aa2.17□□□□□ -2.06
CBF2YGR140W SSQ1Q05931 657 aaPredicted RBP2.17□□□□□ -2.06
CBF2YGR140W CDA2Q06703 312 aa2.17□□□□□ -2.06
CBF2YGR140W ACF2Q12168 779 aa2.17□□□□□ -2.06
CBF2YGR140W YDR262WQ12331 272 aa2.17□□□□□ -2.06
CBF2YGR140W OPI3P05375 206 aa2.16□□□□□ -2.06
CBF2YGR140W ADE5,7P07244 802 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W YAR066WP0CX18 203 aa2.16□□□□□ -2.06
CBF2YGR140W YHR214WP0CX19 203 aa2.16□□□□□ -2.06
CBF2YGR140W KSS1P14681 368 aa2.16□□□□□ -2.06
CBF2YGR140W MRPL25P23369 157 aa2.16□□□□□ -2.06
CBF2YGR140W YUR1P26725 428 aa2.16□□□□□ -2.06
CBF2YGR140W FRE1P32791 686 aa2.16□□□□□ -2.06
CBF2YGR140W UTP25P40498 721 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W VPS25P47142 202 aa2.16□□□□□ -2.06
CBF2YGR140W MRPL50P53724 139 aa2.16□□□□□ -2.06
CBF2YGR140W ECM7Q06200 448 aa2.16□□□□□ -2.06
CBF2YGR140W SAM4Q08985 325 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W QCR6P00127 147 aa2.16□□□□□ -2.06
CBF2YGR140W ARG4P04076 463 aaPredicted RBP2.16□□□□□ -2.06
CBF2YGR140W RPL18AP0CX49 186 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W RPL18BP0CX50 186 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W SPO11P23179 398 aa2.16□□□□□ -2.06
CBF2YGR140W DBR1P24309 405 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W MEK1P24719 497 aaPredicted RBP2.16□□□□□ -2.06
CBF2YGR140W MGR1P25573 417 aa2.16□□□□□ -2.06
CBF2YGR140W DEG1P31115 442 aaKnown RBP2.16□□□□□ -2.06
CBF2YGR140W HXT1P32465 570 aa2.16□□□□□ -2.06
CBF2YGR140W RTR1P40084 226 aaPredicted RBP2.16□□□□□ -2.06
CBF2YGR140W YIL060WP40519 144 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms