RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	GND2	P53319	492 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	TRS31	Q03337	283 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	RPN9	Q04062	393 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	GPI17	Q04080	534 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	COA4	Q05809	96 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	DCS1	Q06151	350 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	YFT2	Q06676	274 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	YDL114W	Q07530	308 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	ATG34	Q12292	412 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	YMR030W-A	Q3E760	96 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	SIR3	P06701	978 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	CDC31	P06704	161 aa	Known RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	RPB4	P20433	221 aa	Predicted RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	VPS33	P20795	691 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	YSP3	P25036	478 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	FEN2	P25621	512 aa	Known RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	RAD14	P28519	371 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	HES1	P35843	434 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	DHR2	P36009	735 aa	Predicted RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	MNN2	P38069	597 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	COS111	P38308	924 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	TSC10	P38342	320 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	YDR089W	P38966	869 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	UME6	P39001	836 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	YJL193W	P39542	402 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	SEO1	P39709	593 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	HAT2	P39984	401 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	SER3	P40054	469 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	DIM1	P41819	318 aa	Known RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	SRB7	P47822	140 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	YDL183C	P48569	320 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	ATP22	P50273	684 aa	Predicted RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	MUP1	P50276	574 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	UBC11	P52492	156 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	NUP84	P52891	726 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	FLC3	P53121	802 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	USE1	P53146	245 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	RBG2	P53295	368 aa	Known RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	TIM13	P53299	105 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	CUS2	P53830	285 aa	Predicted RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	SLM2	P53955	656 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	SPP2	Q02521	185 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	NUP100	Q02629	959 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	SMA1	Q02651	245 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	NHP10	Q03435	203 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	ACL4	Q03771	387 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	CSN9	Q03981	162 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	YML053C	Q04978	212 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	ENT2	Q05785	613 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	BCP1	Q06338	283 aa		4.05	□□□□□ -1.76
LSB1	YGR136W	SNX3	Q08826	162 aa	Known RBP	4.05	□□□□□ -1.76
LSB1	YGR136W	CAR1	P00812	333 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	ATR1	P13090	542 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	NCP1	P16603	691 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	YAP1	P19880	650 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	DAL81	P21657	970 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	VPS34	P22543	875 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	PHO84	P25297	587 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	YCR090C	P25654	182 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	RPS5	P26783	225 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	BEM1	P29366	551 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	VMA8	P32610	256 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	IMP3	P32899	183 aa	Predicted RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	RPT5	P33297	434 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	ASK1	P35734	292 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	UTP9	P38882	575 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	FMP52	P40008	231 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	AVT6	P40074	448 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	RGI2	P40188	164 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	LRO1	P40345	661 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YIL077C	P40508	320 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	SER33	P40510	469 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	AIM23	P47015	356 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	SNX4	P47057	423 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	PET130	P47065	347 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	AIF1	P52923	378 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YGR016W	P53209	190 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	MEP3	P53390	489 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	DCP2	P53550	970 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	YTP1	P53584	459 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	IPI3	P53877	555 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	LSM3	P57743	89 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	OSH6	Q02201	448 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	ATG21	Q02887	496 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YDR239C	Q03780	787 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	MFB1	Q04922	465 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	HEL2	Q05580	639 aa	Known RBP	4.04	□□□□□ -1.76
LSB1	YGR136W	VID22	Q05934	901 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YEH2	Q07950	538 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YLR031W	Q07978	186 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	APC9	Q12107	265 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YLR046C	Q12253	270 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	MDY2	Q12285	212 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	LAS17	Q12446	633 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	PEX11	Q12462	236 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	YKL033W-A	Q86ZR7	236 aa		4.04	□□□□□ -1.76
LSB1	YGR136W	TOR1	P35169	2470 aa		4.03	□□□□□ -1.76
LSB1	YGR136W	HEM2	P05373	342 aa		4.03	□□□□□ -1.76
LSB1	YGR136W	RPL6B	P05739	176 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms