RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W CRP1P38845 465 aaKnown RBP7.74□□□□□ -1.17
UFD1YGR048W KHA1P40309 873 aa7.74□□□□□ -1.17
UFD1YGR048W PGD1P40356 397 aa7.74□□□□□ -1.17
UFD1YGR048W HIS6P40545 261 aa7.74□□□□□ -1.17
UFD1YGR048W CIN5P40917 295 aa7.74□□□□□ -1.17
UFD1YGR048W ASN2P49090 572 aaKnown RBP7.74□□□□□ -1.17
UFD1YGR048W YNL165WP53891 406 aa7.74□□□□□ -1.17
UFD1YGR048W TOF2Q02208 771 aa7.74□□□□□ -1.17
UFD1YGR048W YPL113CQ02961 396 aa7.74□□□□□ -1.17
UFD1YGR048W UTP21Q06078 939 aaPredicted RBP7.74□□□□□ -1.17
UFD1YGR048W CUR1Q06469 252 aa7.74□□□□□ -1.17
UFD1YGR048W SYT1Q06836 1226 aa7.74□□□□□ -1.17
UFD1YGR048W HFI1Q12060 488 aa7.74□□□□□ -1.17
UFD1YGR048W YLR108CQ12259 485 aa7.74□□□□□ -1.17
UFD1YGR048W GLO4Q12320 285 aa7.74□□□□□ -1.17
UFD1YGR048W PCC1Q3E833 88 aa7.74□□□□□ -1.17
UFD1YGR048W AFI1Q99222 893 aa7.74□□□□□ -1.17
UFD1YGR048W AAC1P04710 309 aa7.73□□□□□ -1.17
UFD1YGR048W LEU4P06208 619 aaKnown RBP7.73□□□□□ -1.17
UFD1YGR048W MET2P08465 486 aa7.73□□□□□ -1.17
UFD1YGR048W GCD1P09032 578 aaPredicted RBP7.73□□□□□ -1.17
UFD1YGR048W FUN30P31380 1131 aa7.73□□□□□ -1.17
UFD1YGR048W TAT1P38085 619 aa7.73□□□□□ -1.17
UFD1YGR048W CHK1P38147 527 aa7.73□□□□□ -1.17
UFD1YGR048W YBL029WP38201 376 aa7.73□□□□□ -1.17
UFD1YGR048W CKB2P38930 258 aa7.73□□□□□ -1.17
UFD1YGR048W MXR1P40029 184 aa7.73□□□□□ -1.17
UFD1YGR048W MGS1P40151 587 aa7.73□□□□□ -1.17
UFD1YGR048W SLM1P40485 686 aa7.73□□□□□ -1.17
UFD1YGR048W YIL024CP40543 189 aa7.73□□□□□ -1.17
UFD1YGR048W GYP8P43570 497 aa7.73□□□□□ -1.17
UFD1YGR048W AAD10P47182 288 aa7.73□□□□□ -1.17
UFD1YGR048W LYS5P50113 272 aa7.73□□□□□ -1.17
UFD1YGR048W SWC4P53201 476 aa7.73□□□□□ -1.17
UFD1YGR048W NRD1P53617 575 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
UFD1YGR048W SLM2P53955 656 aa7.73□□□□□ -1.17
UFD1YGR048W YMR155WQ03795 547 aa7.73□□□□□ -1.17
UFD1YGR048W RAD33Q04231 177 aa7.73□□□□□ -1.17
UFD1YGR048W YLR345WQ06137 509 aa7.73□□□□□ -1.17
UFD1YGR048W MSC6Q08818 692 aaKnown RBP7.73□□□□□ -1.17
UFD1YGR048W YMR030W-AQ3E760 96 aa7.73□□□□□ -1.17
UFD1YGR048W MTR10Q99189 972 aa7.73□□□□□ -1.17
UFD1YGR048W ECM3Q99252 613 aa7.73□□□□□ -1.17
UFD1YGR048W UBR2Q07963 1872 aa7.72□□□□□ -1.17
UFD1YGR048W THP2O13539 261 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W ALG7P07286 448 aa7.72□□□□□ -1.17
UFD1YGR048W TRX1P22217 103 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W CDC50P25656 391 aa7.72□□□□□ -1.17
UFD1YGR048W CHS3P29465 1165 aa7.72□□□□□ -1.17
UFD1YGR048W NAB2P32505 525 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
UFD1YGR048W TMT1P32643 299 aa7.72□□□□□ -1.17
UFD1YGR048W BEM3P32873 1128 aa7.72□□□□□ -1.17
UFD1YGR048W SUI1P32911 108 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W ELF1P36053 145 aa7.72□□□□□ -1.17
UFD1YGR048W GND1P38720 489 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W RGI2P40188 164 aa7.72□□□□□ -1.17
UFD1YGR048W YGR201CP42936 225 aa7.72□□□□□ -1.17
UFD1YGR048W NBP35P52920 328 aa7.72□□□□□ -1.17
UFD1YGR048W COS12P53053 380 aa7.72□□□□□ -1.17
UFD1YGR048W ART5P53244 586 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W MRPL22P53881 309 aa7.72□□□□□ -1.17
UFD1YGR048W YPL108WQ02872 168 aaPredicted RBP7.72□□□□□ -1.17
UFD1YGR048W YDR109CQ04585 715 aa7.72□□□□□ -1.17
UFD1YGR048W PAL1Q05518 499 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W YLR413WQ06689 675 aa7.72□□□□□ -1.17
UFD1YGR048W LCB4Q12246 624 aa7.72□□□□□ -1.17
UFD1YGR048W RPN5Q12250 445 aaKnown RBP7.72□□□□□ -1.17
UFD1YGR048W NYV1Q12255 253 aa7.72□□□□□ -1.17
UFD1YGR048W SUS1Q6WNK7 96 aa7.72□□□□□ -1.17
UFD1YGR048W SUC2P00724 532 aa7.71□□□□□ -1.18
UFD1YGR048W ILV1P00927 576 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W RPS31P05759 152 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W RPS18AP0CX55 146 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W RPS18BP0CX56 146 aaPredicted RBP7.71□□□□□ -1.18
UFD1YGR048W GAL2P13181 574 aa7.71□□□□□ -1.18
UFD1YGR048W HAP4P14064 554 aa7.71□□□□□ -1.18
UFD1YGR048W RNR1P21524 888 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W DBR1P24309 405 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W HCM1P25364 564 aa7.71□□□□□ -1.18
UFD1YGR048W RHB1P25378 209 aa7.71□□□□□ -1.18
UFD1YGR048W POF1P25576 258 aa7.71□□□□□ -1.18
UFD1YGR048W TAH1P25638 111 aaPredicted RBP7.71□□□□□ -1.18
UFD1YGR048W YIM1P28625 365 aa7.71□□□□□ -1.18
UFD1YGR048W ARP2P32381 391 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W SFA1P32771 386 aa7.71□□□□□ -1.18
UFD1YGR048W PEX32P38292 413 aa7.71□□□□□ -1.18
UFD1YGR048W SUL1P38359 859 aa7.71□□□□□ -1.18
UFD1YGR048W PTC7P38797 343 aa7.71□□□□□ -1.18
UFD1YGR048W ERV46P39727 415 aa7.71□□□□□ -1.18
UFD1YGR048W SWM2P40342 146 aa7.71□□□□□ -1.18
UFD1YGR048W YJL218WP40892 196 aaKnown RBP7.71□□□□□ -1.18
UFD1YGR048W RET2P43621 546 aa7.71□□□□□ -1.18
UFD1YGR048W TIM54P47045 478 aa7.71□□□□□ -1.18
UFD1YGR048W SNN1P48232 102 aa7.71□□□□□ -1.18
UFD1YGR048W TOM22P49334 152 aa7.71□□□□□ -1.18
UFD1YGR048W MKC7P53379 596 aa7.71□□□□□ -1.18
UFD1YGR048W CSN9Q03981 162 aa7.71□□□□□ -1.18
UFD1YGR048W YFT2Q06676 274 aa7.71□□□□□ -1.18
UFD1YGR048W GUP2Q08929 609 aa7.71□□□□□ -1.18
UFD1YGR048W YPL260WQ08977 551 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms