RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	VAB2	P40003	282 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	YFL040W	P43562	540 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	NSA1	P53136	463 aa	Predicted RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	LSG1	P53145	640 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	IZH1	Q03419	316 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	MSS11	Q03825	758 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	HRD3	Q05787	833 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	GPN3	Q06543	272 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	TY3A-G	Q12173	290 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	RBD2	Q12270	262 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	YLR122C	Q12312	125 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	CMC2	Q3E7A4	109 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	TY3A-I	Q99219	290 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	TPI1	P00942	248 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	SNC1	P31109	117 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	NUP2	P32499	720 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	UTR4	P32626	227 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	UBX6	P47049	396 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	MNN10	P50108	393 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	YGL117W	P53133	265 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	YGR079W	P53249	370 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	POM152	P39685	1337 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	SPT3	P06844	337 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	PRP16	P15938	1071 aa	Predicted RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	SAG1	P20840	650 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	AMD2	P22580	549 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	VPH2	P32341	215 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	ELM1	P32801	640 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	PRM9	P39551	298 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	FAU1	P40099	211 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	ARG2	P40360	574 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MTL1	P53214	551 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	COG2	P53271	262 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	ASM4	Q05166	528 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	ARV1	Q06541	321 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	RAD34	Q06665	692 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	YDR215C	Q12240	137 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	CHS2	P14180	963 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	URA4	P20051	364 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	PRS1	P32895	427 aa	Known RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	APD1	P38281	316 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	LEU5	P38702	357 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MNL1	P38888	796 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	SSN8	P47821	323 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MKC7	P53379	596 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	FMP30	Q02883	468 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	PMD1	P32634	1753 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	VPS63	O13549	108 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MRP2	P10663	115 aa	Predicted RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	TYR1	P20049	452 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	SKT5	P34226	696 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	PRS4	P38063	326 aa	Predicted RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	AFG3	P39925	761 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	AIR1	P40507	360 aa	Known RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	PHO86	P46956	311 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	YJL163C	P46996	555 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	DBP6	P53734	629 aa	Known RBP	3.11	□□□□□ -1.91
XRN1	YGL173C	MPS1	P54199	764 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
XRN1	YGL173C	EKI1	Q03764	534 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	YDR179W-A	Q03983	463 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	MRPL1	Q04599	285 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	LAS17	Q12446	633 aa		3.11	□□□□□ -1.91
XRN1	YGL173C	SRV2	P17555	526 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	MET22	P32179	357 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	CYM1	P32898	989 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	MNN2	P38069	597 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	MSS4	P38994	779 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	FHL1	P39521	936 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	CSM2	P40465	213 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	AIM23	P47015	356 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	BUD17	P53727	317 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	GTO3	Q04806	366 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	BUR2	Q05949	395 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	RGT2	Q12300	763 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	AHC1	Q12433	566 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	PTC6	P25646	442 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	MUP3	P38734	546 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	SPC97	P38863	823 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	MBB1	P39534	108 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	BTT1	P40314	149 aa	Predicted RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	YJL171C	P46992	396 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	KEL2	P50090	882 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	YLR040C	Q07988	224 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	GLE1	Q12315	538 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	ILV6	P25605	309 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	KSP1	P38691	1029 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	ARO9	P38840	513 aa	Predicted RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	FMP33	P46998	180 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	BIO3	P50277	480 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	MND1	P53102	219 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	DRN1	P53255	507 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	RRP46	P53256	223 aa	Predicted RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	MPP6	P53725	186 aa	Predicted RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	RHO5	P53879	331 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	HCR1	Q05775	265 aa	Known RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	SSQ1	Q05931	657 aa	Predicted RBP	3.1	□□□□□ -1.91
XRN1	YGL173C	YET3	Q07451	203 aa		3.1	□□□□□ -1.91
XRN1	YGL173C	PML1	Q07930	204 aa	Predicted RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms