RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YLR108CQ12259 485 aa3.04□□□□□ -1.92
SEC4YFL005W PDE2P06776 526 aa3.03□□□□□ -1.92
SEC4YFL005W SLY1P22213 666 aa3.03□□□□□ -1.92
SEC4YFL005W CYS4P32582 507 aaKnown RBP3.03□□□□□ -1.92
SEC4YFL005W KKQ8P36004 724 aa3.03□□□□□ -1.92
SEC4YFL005W BRO1P48582 844 aa3.03□□□□□ -1.92
SEC4YFL005W RRN11Q04712 507 aa3.03□□□□□ -1.92
SEC4YFL005W SNT309Q06091 175 aaPredicted RBP3.03□□□□□ -1.92
SEC4YFL005W YTH1Q06102 208 aaPredicted RBP3.03□□□□□ -1.92
SEC4YFL005W NDL1Q06568 189 aa3.03□□□□□ -1.92
SEC4YFL005W NSE1Q07913 336 aa3.03□□□□□ -1.92
SEC4YFL005W SRL2Q12020 392 aa3.03□□□□□ -1.92
SEC4YFL005W CPR3P25719 182 aa3.02□□□□□ -1.93
SEC4YFL005W APE4P38821 490 aa3.02□□□□□ -1.93
SEC4YFL005W YHR218WP38899 603 aa3.02□□□□□ -1.93
SEC4YFL005W MLC1P53141 149 aa3.02□□□□□ -1.93
SEC4YFL005W RHO5P53879 331 aaKnown RBP3.02□□□□□ -1.93
SEC4YFL005W IMP4P53941 290 aaKnown RBP3.02□□□□□ -1.93
SEC4YFL005W HXT11P54862 567 aa3.02□□□□□ -1.93
SEC4YFL005W STD1Q02794 444 aa3.02□□□□□ -1.93
SEC4YFL005W MMT1Q03218 510 aa3.02□□□□□ -1.93
SEC4YFL005W PPM1Q04081 328 aa3.02□□□□□ -1.93
SEC4YFL005W SCW10Q04951 389 aa3.02□□□□□ -1.93
SEC4YFL005W RRP9Q06506 573 aaKnown RBP3.02□□□□□ -1.93
SEC4YFL005W ESA1Q08649 445 aa3.02□□□□□ -1.93
SEC4YFL005W SNX3Q08826 162 aaKnown RBP3.02□□□□□ -1.93
SEC4YFL005W SKS1Q12505 502 aa3.02□□□□□ -1.93
SEC4YFL005W YER078W-AQ3E7A2 54 aa3.02□□□□□ -1.93
SEC4YFL005W CDC21P06785 304 aa3.01□□□□□ -1.93
SEC4YFL005W DST1P07273 309 aa3.01□□□□□ -1.93
SEC4YFL005W IMA3P0CW40 589 aa3.01□□□□□ -1.93
SEC4YFL005W IMA4P0CW41 589 aa3.01□□□□□ -1.93
SEC4YFL005W SDH3P33421 198 aa3.01□□□□□ -1.93
SEC4YFL005W YBR056WP38081 501 aa3.01□□□□□ -1.93
SEC4YFL005W INM1P38710 295 aa3.01□□□□□ -1.93
SEC4YFL005W MTC6P38849 526 aa3.01□□□□□ -1.93
SEC4YFL005W MLH1P38920 769 aa3.01□□□□□ -1.93
SEC4YFL005W YER079WP40052 210 aaKnown RBP3.01□□□□□ -1.93
SEC4YFL005W AZR1P50080 613 aa3.01□□□□□ -1.93
SEC4YFL005W BOR1P53838 576 aa3.01□□□□□ -1.93
SEC4YFL005W MDG1P53885 366 aa3.01□□□□□ -1.93
SEC4YFL005W IMA2Q08295 589 aa3.01□□□□□ -1.93
SEC4YFL005W TPT1Q12272 230 aaKnown RBP3.01□□□□□ -1.93
SEC4YFL005W CPR4P25334 318 aa3□□□□□ -1.93
SEC4YFL005W PHO91P27514 894 aa3□□□□□ -1.93
SEC4YFL005W MUD1P32605 298 aaKnown RBP3□□□□□ -1.93
SEC4YFL005W ATP3P38077 311 aaKnown RBP3□□□□□ -1.93
SEC4YFL005W PFF1P38244 976 aa3□□□□□ -1.93
SEC4YFL005W YBR137WP38276 179 aa3□□□□□ -1.93
SEC4YFL005W GDT1P38301 280 aaPredicted RBP3□□□□□ -1.93
SEC4YFL005W GPI16P38875 610 aa3□□□□□ -1.93
SEC4YFL005W WWM1P43582 211 aaKnown RBP3□□□□□ -1.93
SEC4YFL005W SFH5P47008 294 aa3□□□□□ -1.93
SEC4YFL005W EOS1P53938 366 aa3□□□□□ -1.93
SEC4YFL005W YDR541CQ03049 344 aa3□□□□□ -1.93
SEC4YFL005W BCH1Q05029 724 aa3□□□□□ -1.93
SEC4YFL005W RPL6BP05739 176 aaKnown RBP2.99□□□□□ -1.93
SEC4YFL005W NAT1P12945 854 aaKnown RBP2.99□□□□□ -1.93
SEC4YFL005W SPT15P13393 240 aaKnown RBP2.99□□□□□ -1.93
SEC4YFL005W NRP1P32770 719 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SEC4YFL005W RRP1P35178 278 aaPredicted RBP2.99□□□□□ -1.93
SEC4YFL005W MRPL4P36517 319 aa2.99□□□□□ -1.93
SEC4YFL005W YIL067CP40514 678 aa2.99□□□□□ -1.93
SEC4YFL005W NCA3P46955 337 aa2.99□□□□□ -1.93
SEC4YFL005W ROG1P53118 685 aa2.99□□□□□ -1.93
SEC4YFL005W RPL6AQ02326 176 aaKnown RBP2.99□□□□□ -1.93
SEC4YFL005W SMA2Q04658 369 aa2.99□□□□□ -1.93
SEC4YFL005W ERV2Q12284 196 aa2.99□□□□□ -1.93
SEC4YFL005W HHF1P02309 103 aaKnown RBP2.98□□□□□ -1.93
SEC4YFL005W NFT1P0CE68 1218 aa2.98□□□□□ -1.93
SEC4YFL005W CBS2P14905 389 aa2.98□□□□□ -1.93
SEC4YFL005W YCL068CP25593 260 aa2.98□□□□□ -1.93
SEC4YFL005W DPH2P32461 534 aa2.98□□□□□ -1.93
SEC4YFL005W VPH1P32563 840 aaKnown RBP2.98□□□□□ -1.93
SEC4YFL005W SKN1P33336 771 aa2.98□□□□□ -1.93
SEC4YFL005W PAD1P33751 242 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SEC4YFL005W DAD2P36162 133 aa2.98□□□□□ -1.93
SEC4YFL005W QDR3P38227 689 aa2.98□□□□□ -1.93
SEC4YFL005W STP2P38704 541 aa2.98□□□□□ -1.93
SEC4YFL005W WSS1P38838 269 aa2.98□□□□□ -1.93
SEC4YFL005W PRM5P40476 318 aa2.98□□□□□ -1.93
SEC4YFL005W CHS6P40955 746 aa2.98□□□□□ -1.93
SEC4YFL005W PAC11P40960 533 aa2.98□□□□□ -1.93
SEC4YFL005W EPL1P43572 832 aa2.98□□□□□ -1.93
SEC4YFL005W ASN2P49090 572 aaKnown RBP2.98□□□□□ -1.93
SEC4YFL005W TOF1P53840 1238 aa2.98□□□□□ -1.93
SEC4YFL005W MEH1Q02205 184 aa2.98□□□□□ -1.93
SEC4YFL005W PRP3Q03338 469 aaPredicted RBP2.98□□□□□ -1.93
SEC4YFL005W HER2Q03557 464 aa2.98□□□□□ -1.93
SEC4YFL005W PBA1Q05778 276 aa2.98□□□□□ -1.93
SEC4YFL005W TSR1Q07381 788 aaKnown RBP2.98□□□□□ -1.93
SEC4YFL005W YDR061WQ12298 539 aa2.98□□□□□ -1.93
SEC4YFL005W CEX1Q12453 761 aa2.98□□□□□ -1.93
SEC4YFL005W FRE6Q12473 712 aa2.98□□□□□ -1.93
SEC4YFL005W DEG1P31115 442 aaKnown RBP2.97□□□□□ -1.93
SEC4YFL005W YSC83P32792 385 aa2.97□□□□□ -1.93
SEC4YFL005W YBL059WP34224 193 aa2.97□□□□□ -1.93
SEC4YFL005W YBR139WP38109 508 aa2.97□□□□□ -1.93
SEC4YFL005W CHK1P38147 527 aa2.97□□□□□ -1.93
SEC4YFL005W KAP104P38217 918 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms