RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	AAT1	Q01802	451 aa		0.95	□□□□□ -2.26
UBP3	YER151C	TDA1	Q03533	586 aa		0.95	□□□□□ -2.26
UBP3	YER151C	PDS5	Q04264	1277 aa		0.95	□□□□□ -2.26
UBP3	YER151C	URC2	Q04411	772 aa		0.95	□□□□□ -2.26
UBP3	YER151C	TFC6	Q06339	672 aa		0.95	□□□□□ -2.26
UBP3	YER151C	TPO3	Q06451	622 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ETT1	Q08421	412 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	IES4	Q08561	116 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RRP12	Q12754	1228 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	TUF1	P02992	437 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	RPS14A	P06367	137 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	YFL068W	P0CX99	160 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YLL066W-A	P0CY00	160 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YLL067W-A	P0CY01	160 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SAG1	P20840	650 aa		0.95	□□□□□ -2.26
UBP3	YER151C	MAK31	P23059	88 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YCR043C	P25361	127 aa		0.95	□□□□□ -2.26
UBP3	YER151C	CPR3	P25719	182 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RPS5	P26783	225 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	IDH2	P28241	369 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	ARO2	P28777	376 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	IME2	P32581	645 aa		0.95	□□□□□ -2.26
UBP3	YER151C	GCG1	P32656	232 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	SUI1	P32911	108 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	PSY4	P38193	441 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ARC40	P38328	384 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	YHI9	P38765	294 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RPS14B	P39516	138 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	YIL086C	P40503	102 aa		0.95	□□□□□ -2.26
UBP3	YER151C	IRC7	P43623	340 aa		0.95	□□□□□ -2.26
UBP3	YER151C	BRO1	P48582	844 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ASE1	P50275	885 aa		0.95	□□□□□ -2.26
UBP3	YER151C	STR3	P53101	465 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	YGL081W	P53156	320 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YNR068C	P53754	272 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RHO5	P53879	331 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	YNL144C	P53907	740 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ASI1	P54074	624 aa		0.95	□□□□□ -2.26
UBP3	YER151C	EMI2	Q04409	500 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	RSF1	Q05043	376 aa		0.95	□□□□□ -2.26
UBP3	YER151C	TAZ1	Q06510	381 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SNA4	Q07549	140 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ATX2	Q12067	313 aa		0.95	□□□□□ -2.26
UBP3	YER151C	PFK27	Q12471	397 aa	Predicted RBP	0.95	□□□□□ -2.26
UBP3	YER151C	GAL7	P08431	366 aa		0.94	□□□□□ -2.26
UBP3	YER151C	CHO1	P08456	276 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ARO3	P14843	370 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	GUK1	P15454	187 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	MET8	P15807	274 aa		0.94	□□□□□ -2.26
UBP3	YER151C	MGT1	P26188	188 aa		0.94	□□□□□ -2.26
UBP3	YER151C	BUB3	P26449	341 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ERG3	P32353	365 aa		0.94	□□□□□ -2.26
UBP3	YER151C	TFC3	P34111	1160 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YOR062C	P36025	268 aa		0.94	□□□□□ -2.26
UBP3	YER151C	PCH2	P38126	564 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YHR045W	P38775	560 aa		0.94	□□□□□ -2.26
UBP3	YER151C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
UBP3	YER151C	SLZ1	P40167	298 aa		0.94	□□□□□ -2.26
UBP3	YER151C	RFC2	P40348	353 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ERR3	P42222	437 aa		0.94	□□□□□ -2.26
UBP3	YER151C	SNZ3	P43545	298 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ZAP1	P47043	880 aa		0.94	□□□□□ -2.26
UBP3	YER151C	MND1	P53102	219 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YGR079W	P53249	370 aa		0.94	□□□□□ -2.26
UBP3	YER151C	SNZ2	P53824	298 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YNL146W	P53906	100 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YMR310C	Q04867	317 aa	Predicted RBP	0.94	□□□□□ -2.26
UBP3	YER151C	YMR317W	Q04893	1140 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YLR413W	Q06689	675 aa		0.94	□□□□□ -2.26
UBP3	YER151C	NRT1	Q08485	598 aa		0.94	□□□□□ -2.26
UBP3	YER151C	FRE3	Q08905	711 aa		0.94	□□□□□ -2.26
UBP3	YER151C	MED1	Q12321	566 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YPR1	Q12458	312 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YER175W-A	Q8TGU4	54 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ADE4	P04046	510 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	KIN28	P06242	306 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YML003W	P0CF16	290 aa		0.94	□□□□□ -2.26
UBP3	YER151C	SST2	P11972	698 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	GLK1	P17709	500 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	RPO26	P20435	155 aa		0.94	□□□□□ -2.26
UBP3	YER151C	RVS161	P25343	265 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	MRC1	P25588	1096 aa		0.94	□□□□□ -2.26
UBP3	YER151C	RFA2	P26754	273 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	SOF1	P33750	489 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	NIC96	P34077	839 aa		0.94	□□□□□ -2.26
UBP3	YER151C	NTR2	P36118	322 aa	Predicted RBP	0.94	□□□□□ -2.26
UBP3	YER151C	YBR225W	P38321	900 aa		0.94	□□□□□ -2.26
UBP3	YER151C	VBA2	P38358	474 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	YHR182W	P38870	785 aa		0.94	□□□□□ -2.26
UBP3	YER151C	PUG1	P40100	303 aa		0.94	□□□□□ -2.26
UBP3	YER151C	HIS6	P40545	261 aa		0.94	□□□□□ -2.26
UBP3	YER151C	DJP1	P40564	432 aa		0.94	□□□□□ -2.26
UBP3	YER151C	IDS2	P46958	469 aa		0.94	□□□□□ -2.26
UBP3	YER151C	MDV1	P47025	714 aa		0.94	□□□□□ -2.26
UBP3	YER151C	YJL055W	P47044	245 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ECM27	P47144	725 aa		0.94	□□□□□ -2.26
UBP3	YER151C	ARC35	P53731	342 aa	Known RBP	0.94	□□□□□ -2.26
UBP3	YER151C	EFM6	P53970	246 aa		0.94	□□□□□ -2.26
UBP3	YER151C	KTR6	P54070	446 aa		0.94	□□□□□ -2.26
UBP3	YER151C	SLD5	Q03406	294 aa		0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms